Browse by Collection: UCSD Research Data Collections
View current collections below. Click an image or link for a full description.
Aerosol and Cloud Observations in La Jolla, CA, in May-June 2011 during SOLEDAD (Stratocumulus Observations of Los-Angeles Emissions Derived Aerosol-Droplets)
- Measurements of polluted marine aerosol and cloud droplet chemical and physical properties at Mt. Soledad and Scripps Pier in La Jolla, California.
- Creation Date: 01 May 2012 to 18 June 2012
- Non-refractory aerosol particle and refractory black carbon mass concentrations, size distributions, and coatings along with single particle compositions and organic aerosol functional groups in Fresno and Fontana.
- Creation Date: 19 Dec 2014 to 13 Jan 2015 (Fresno); 04 to 28 July 2015 (Fontana)
Aerosol Particle Chemical and Physical Measurements on the 2015, 2016, 2017, and 2018 North Atlantic Aerosols and Marine Ecosystems Study (NAAMES) Research Cruises
- Size distributions, organic functional groups, and non-refractory and single particle composition of North Atlantic marine aerosol particles
- Creation Date: 2015-11-06 to 2015-11-30; 2016-05-11 to 2016-06-05; 2017-08-30 to 2017-09-24
Ambient and Sea Sweep Generated Aerosol Measurements in the North Atlantic in May-June 2014 during WACS2 (Western Atlantic Climate Study 2)
- Measurements of ambient and seawater generated marine aerosol particle chemical and physical properties in the North Atlantic in May-June 2014.
- Creation Date: 20 May 2014 to 05 June 2014
- This database represents an ongoing survey to document all the bee species that occur within the bounds of San Diego County. As this project is still ongoing, the database will be updated periodically with additions and/or corrections.
- Creation Date: July 2015
- This collection shows bee behaviors and methods used to study bee behaviors.
- Creation Date: 2005-2014
- This is a voluminous data set containing acoustic and trawl data collected on CalCOFI (California Cooperative Oceanic Fisheries Investigations) cruises.
- Creation Date: 2009 to 2015,
- Public records associated with most of the local tax measures put before California voters between 1986 and 2012, including excerpts from official voter information guides and sample ballots, and proposed ordinance text, where available.
- Creation Date: 2014-2016,
- The objective of this survey was to collect statewide data on tobacco-related behaviors, knowledge of and attitudes towards smoking, and monitoring the effect of State-initiated programs on individual target populations.
- Creation Date: 2011-,
- The objective of these surveys is to collect representative statewide data on cigarette smoking behavior, attitudes towards smoking, media exposure to smoking, and use of tobacco products other than cigarettes, from populations living in California.
- Creation Date: 1990-
- Single Particle Soot Photometer (SP2) measurements of aerosol refractory black carbon (BC) content for individual particles and Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups of submicron particles at Parque Morelos during Cal-Mex 2010 from 15 May to 30 June.
- Creation Date: 2010-05-15 to 2010-06-30
Carbonaceous Aerosol Particle Measurements from Southeast Atmosphere Study (SOAS) 2013 in Look Rock, Tennessee, USA
- HR-Tof-AMS submicon mass spectra for ensemable mass and single paritcles (by LS), Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups of submicron particles,and size distributions at Look Rock during SOAS 2013.
- Creation Date: 1 June 2013 to 18 July 2013
- Full-surround 3-D images make up this collection of original and rendered composite images called CAVEcams which are very high-resolution images for both left and right eye, normally viewed in virtual reality systems, either CAVEs or HMDs.
- Creation Date: 2009 - present,
- A collection of high resolution 2D, 3D and 4D data from light and electron microscopy of tissues from the nervous system and other systems.
- Creation Date: 1986 to 2012,
- A wide array of chemical, physical, and computational measurements, models, and data sets for laboratory-generated sea spray aerosols and model systems. Each item in the collection is associated with a published peer-reviewed manuscript.
- Creation Date: 2010-
Data from: 'Whale Wave': shifting strategies structure the complex use of critical fjord habitat by humpbacks
- This collection contains the data, R programming files, and detailed protocols for various aspects of analysis for the publication: Keen et al. 2016. "Whale Wave": shifting strategies structure the complex use of critical fjord habitat by humpbacks.
- Creation Date: 2005 - 2015,
- To study how cellular traits produce population phenotypes, we built living vector fields from single-cell timecourses of the proteins Gal3p and Gal1p as yeast switched to galactose from other nutrients. This collection has data and analysis codes.
- Creation Date: 2015-2016,
Data from: Allostery through the Computational Microscope: cAMP Activation of a Canonical Signalling Domain
- This collection contains the molecular dynamics trajectories scripts and models used in the paper “Allostery through the computational microscope: cAMP activation of a canonical signalling domain”.
- Creation Date: 2014-08-24
Data from: Carbon and Oxygen Isotopic Fractionation in the Products of Low-Temperature VUV Photodissociation of Carbon Monoxide
- Carbon and oxygen isotopic fractionation during photodissociation by VUV photons. This Matlab based model only calculates the isotope effect in the self-shielding process and not by any other means (e.g., predissociation). Data files are included.
- Creation Date: 2016-2018
Data from: Carbonic Anhydrases, EPF2 and a Novel Protease Mediate CO2 Control of Stomatal Development
- RNA-Seq experiments analyzing the Arabidopsis response to low and elevated carbon dioxide growing conditions were conducted to capture early signaling events as seedlings were adapting to stress.
- Creation Date: 2012-2013
- The dataset contains simulations of water vapor transport from 22 CMIP5 models including the historical, RCP4.5, and RCP8.5 runs.
- Creation Date: 2014-2015
- This project uses an original dataset of field commanders in post-civil war Tajikistan to show that warlords from the victorious faction were as likely to be purged from the ruling coalition in a given year as warlords from the defeated faction.
- Creation Date: 2012
- Data from a Self-Calibrating Pressure Recorder (SCPR) deployed at Axial Seamount from 2013 to 2015. This is seafloor height change (cm), converted from pressure (kPa), corrected for ocean tides and pressure gauge drift.
- Creation Date: 2015-08-25,
- Molecular dynamics input files, trajectories and analysis scripts used in the paper "Electrostatic interactions as mediators in the allosteric network of PKA RIalpha".
- Creation Date: 2015-09-15,
Data from: Episodic Southern Ocean heat loss and its mixed layer impacts revealed by the furthest south multi-year surface flux mooring
- This dataset contains Quality Controlled daily mean air-sea heat flux estimates from the NSF Ocean Observatories Initiative Southern Ocean mooring site for the period 2015 to 2017, as used in the analysis of Ogle et al. 2018 (doi:10.1029/2017GL076909)
- Creation Date: 2015-2017
- Analysis of approximately 1.25 million Jupyter Notebooks downloaded from public repositories on GitHub in July 2017.
- Creation Date: July 2017
Data from: Immersive Visualization and Curation of Archaeological Heritage Data: Çatalhöyük and the Dig@IT App
- The purpose of this collection is to curate online all the 3D models and related metadata representing the three-dimensional stratigraphy of Çatalhöyük Building 89 as they are disseminated through the open source virtual reality application Dig@IT.
- Creation Date: 2011-2015,
Data from: Is the Mediterranean the New Rio Grande? U.S. and E.U. Immigration Pressures in the Long Run
- This project uses a gravity-style model to project bilateral migration flows for the next 40 years. It shows that Europe—unlike the US—will face substantial, demographically driven migration pressures from across the Mediterranean for decades to come.
- Creation Date: 2016-01-01 to 2016-05-31
Data from: Latent profile analysis of objectively measured sleep, physical activity, and sedentary time and associations with health in adult women
- This dataset represents the analysis variables for a group of 372 women collected at 4 different sites across the United States, including sleep quality, physical activity and sedentary behaviors.
- Creation Date: 2012-10-10 to 2014-01-13
Data from: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning
- The kinetic rate constants of four biochemically relevant ligand-receptor systems were estimated and described in a publication. This collection includes input files, output files, trajectories, and statistics associated with the study.
- Creation Date: 2013-2015
- Dataset contains data by country for about 150 countries on GDP per capita, employment share in agriculture, value added share in agriculture, agricultural productivity gap, average hours worked, years of schooling, and human capital.
- Creation Date: 1988-2011,
Data from: The relations between sleep, time of physical activity, and time outdoors among adult women
- Exploring the relation between physical activity, time spent outdoors and sleep quality and duration.
- Creation Date: 2012-10-10 to 2014-01-13
Data from: Urbanization-induced habitat fragmentation erodes multiple components of temporal diversity in a Southern California native bee assemblage
- A dataset of bees and plants in coastal sage scrub reserves and habitat fragments in coastal San Diego County, collected by PhD student Keng-Lou James Hung in 2011 and 2012.
- Creation Date: 2011-04-12 to 2012-08-13
- This collection contains the code, data, and output files associated with the article indicated herein.
- Creation Date: 2012,
- DataMares holds a massive amount of fishery, reef, mangrove, and other data pertaining to the ecology of Mexico, particularly coastal and marine ecosystems of the Gulf of California, and delivers this information in an interactive and digestible manner.
- Creation Date: 1998 to present
- This collection contains databases from regular surveys conducted to track annual changes in the structure, function, and health of marine ecosystems, as well as organisms like fishes and invertebrates at numerous island and coastal sites.
- Creation Date: 1998 to 2015
- The datasets in this collection are used for analyses on relationships between different ecosystems, as well as humans and the habitats surrounding us, to elucidate the impact that anthropogenic activities have on the environment.
- Creation Date: 2014 to 2016
- This collection contains robust, high-quality scientific information related to Mexico-specific ocean fisheries and their relationship to marine reserves, coastal and marine ecosystems, and climate change. It also contains datasets with information on fishing activities collected with the participation of local fishermen.
- Creation Date: 1950-01-01 to 2014-08-01,
- Data on 7 heavy metals are available from samples of Halobates collected from the Pacific Ocean: Cr (chromium), Cu (copper), Pb (lead), Mn (manganese), Ni (nickel), Ti (titanium) and Zn (zinc).
- Creation Date: 1961-1978
- Files relevant to the 2016 archaeological excavations of the site Kastrouli, Greece including artifact, photography, geospatial, and other data.
- Creation Date: July 20 – August 3, 2016,
- This collection consists of data and materials from a subset of published eye movement studies of reading conducted in Keith Rayner’s Eyetracking Lab at UCSD from 2008-2015
- Creation Date: 2008-2015
- A collection of archaeological artifacts and data for the excavation of the Khirbat en-Nahas site, and exploration of Iron Age state formation in southern Jordan.
- Creation Date: 2002-2009
Marine background and plume aerosol measurements off the coast of California in July-August 2011 during E-PEACE (Eastern Pacific Emitted Aerosol Cloud Experiment)
- Measurements of background, generated smoke and cargo ship plume aerosol particles and their chemical and physical properties. Measurements include shipboard measurements near the ocean surface.
- Creation Date: 12 July 2011 to 18 August 2011
Measurements of Generated and Ambient Marine Aerosol Particles in August 2012 on board the R/V Ronald H. Brown during the Western Atlantic Climate Study (WACS)
- Measurements of generated marine aerosol particle physical and chemical properties.
- Creation Date: 2012-08-19 to 2012-08-27
Measurements of Generated and Ambient Marine Aerosol Particles in May and June 2010 on board the R/V Atlantis during the California Nexus (CalNex) Experiment
- Measurements of generated marine aerosol particle physical and chemical properties.
- Creation Date: 2010-05-14 to 2010-06-08,
Organic and Elemental Composition of Submicron Aerosol Particles during AWARE at McMurdo Station, Antarctica
- Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups and X-ray Fluorescence (XRF) of elements in submicron particles at McMurdo Station, Antarctica.
- Creation Date: 29 Nov 2015 to 19 Dec 2016
- This project was the result of an ongoing effort by the Laboratory for Computational Astrophysics, leading to development of the Enzo simulation software capable of a seven-level adaptive mesh refinement (AMR) cosmology simulation.
- Creation Date: 2005-2012
- This collection contains measurements of atmospheric CO2 concentration and isotopic abundances at an array of stations, from the Arctic to Antarctica.
- Creation Date: 1957 - present
- A growing archive of sea-floor samples and associated data supporting a diverse variety of scientific research.
- Creation Date: 1950-2006
- Biogeochemical profiling floats in the Southern Ocean deployed by the SOCCOM program.
- Creation Date: 27 March 2014 - present