Library Digital Collections

Browse by Collection: UCSD Research Data Collections

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  1. Aerosol and Cloud Observations in La Jolla, CA, in May-June 2011 during SOLEDAD (Stratocumulus Observations of Los-Angeles Emissions Derived Aerosol-Droplets)

    • Measurements of polluted marine aerosol and cloud droplet chemical and physical properties at Mt. Soledad and Scripps Pier in La Jolla, California.
    • Creation Date: 01 May 2012 to 18 June 2012
  2. Aerosol Composition and Size Measurements at Fresno and Fontana

    • Non-refractory aerosol particle and refractory black carbon mass concentrations, size distributions, and coatings along with single particle compositions and organic aerosol functional groups in Fresno and Fontana.
    • Creation Date: 19 Dec 2014 to 13 Jan 2015 (Fresno); 04 to 28 July 2015 (Fontana)
  3. An annotated checklist of the bees (Hymenoptera: Anthophila) of San Diego County, California

    • This database represents an ongoing survey to document all the bee species that occur within the bounds of San Diego County. As this project is still ongoing, the database will be updated periodically with additions and/or corrections.
    • Creation Date: July 2015
  4. Bee Research Methods: Video Demonstrations

    • This collection shows bee behaviors and methods used to study bee behaviors.
    • Creation Date: 2005-2014
  5. California Cooperative Oceanic Fisheries Investigations (CalCOFI): Acoustic and Trawl Data

    • This is a voluminous data set containing acoustic and trawl data collected on CalCOFI (California Cooperative Oceanic Fisheries Investigations) cruises.
    • Creation Date: 2009 to 2015,
  6. California Smokers Cohort (CSC)

    • The objective of this survey was to collect statewide data on tobacco-related behaviors, knowledge of and attitudes towards smoking, and monitoring the effect of State-initiated programs on individual target populations.
    • Creation Date: 2011-,
  7. California Tobacco Survey (CTS)

    • The objective of these surveys is to collect representative statewide data on cigarette smoking behavior, attitudes towards smoking, media exposure to smoking, and use of tobacco products other than cigarettes, from populations living in California.
    • Creation Date: 1990-
  8. Carbonaceous Aerosol Particle Measurements from Cal-Mex 2010 in Tijuana, Mexico

    • Single Particle Soot Photometer (SP2) measurements of aerosol refractory black carbon (BC) content for individual particles and Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups of submicron particles at Parque Morelos during Cal-Mex 2010 from 15 May to 30 June.
    • Creation Date: 2010-05-15 to 2010-06-30
  9. Carbonaceous Aerosol Particle Measurements from Southeast Atmosphere Study (SOAS) 2013 in Look Rock, Tennessee, USA

    • HR-Tof-AMS submicon mass spectra for ensemable mass and single paritcles (by LS), Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups of submicron particles,and size distributions at Look Rock during SOAS 2013.
    • Creation Date: 1 June 2013 to 18 July 2013
  10. CAVEcam Virtual Reality Photography Collection

    • Full-surround 3-D images make up this collection of original and rendered composite images called CAVEcams which are very high-resolution images for both left and right eye, normally viewed in virtual reality systems, either CAVEs or HMDs.
    • Creation Date: 2009 - present,
  11. Data from: 'Whale Wave': shifting strategies structure the complex use of critical fjord habitat by humpbacks

    • This collection contains the data, R programming files, and detailed protocols for various aspects of analysis for the publication: Keen et al. 2016. "Whale Wave": shifting strategies structure the complex use of critical fjord habitat by humpbacks.
    • Creation Date: 2005 - 2015,
  12. Data from: A Living Vector Field Reveals Constraints on Galactose Network Induction in Yeast

    • To study how cellular traits produce population phenotypes, we built living vector fields from single-cell timecourses of the proteins Gal3p and Gal1p as yeast switched to galactose from other nutrients. This collection has data and analysis codes.
    • Creation Date: 2015-2016,
  13. Data from: Allostery through the Computational Microscope: cAMP Activation of a Canonical Signalling Domain

    • This collection contains the molecular dynamics trajectories scripts and models used in the paper “Allostery through the computational microscope: cAMP activation of a canonical signalling domain”.
    • Creation Date: 2014-08-24
  14. Data from: Automation and Heat Transfer Characterization of Immersion Mode Spectroscopy for Analysis of Ice Nucleating Particles

    • The heat transfer properties of the Automated Ice Spectrometer (AIS) are characterized using a finite-element analysis based heat transfer simulation. Measurements of illite NX ice nucleation particles (INP) freezing temperature are included.
    • Creation Date: June 2016 to December 2016
  15. Data from: Carbonic Anhydrases, EPF2 and a Novel Protease Mediate CO2 Control of Stomatal Development

    • RNA-Seq experiments analyzing the Arabidopsis response to low and elevated carbon dioxide growing conditions were conducted to capture early signaling events as seedlings were adapting to stress.
    • Creation Date: 2012-2013
  16. Data from: Commitment Problems or Bidding Wars? Rebel Fragmentation as Peace Building

    • This project uses an original dataset of field commanders in post-civil war Tajikistan to show that warlords from the victorious faction were as likely to be purged from the ruling coalition in a given year as warlords from the defeated faction.
    • Creation Date: 2012
  17. Data from: Drift-Corrected Seafloor Vertical Deformation at Axial Seamount 2013-2014

    • Data from a Self-Calibrating Pressure Recorder (SCPR) deployed at Axial Seamount from 2013 to 2015. This is seafloor height change (cm), converted from pressure (kPa), corrected for ocean tides and pressure gauge drift.
    • Creation Date: 2015-08-25,
  18. Data from: Electrostatic interactions as mediators in the allosteric activation of PKA RIalpha

    • Molecular dynamics input files, trajectories and analysis scripts used in the paper "Electrostatic interactions as mediators in the allosteric network of PKA RIalpha".
    • Creation Date: 2015-09-15,
  19. Data from: Immersive Visualization and Curation of Archaeological Heritage Data: Çatalhöyük and the Dig@IT App

    • The purpose of this collection is to curate online all the 3D models and related metadata representing the three-dimensional stratigraphy of Çatalhöyük Building 89 as they are disseminated through the open source virtual reality application Dig@IT.
    • Creation Date: 2011-2015,
  20. Data from: Is the Mediterranean the New Rio Grande? U.S. and E.U. Immigration Pressures in the Long Run

    • This project uses a gravity-style model to project bilateral migration flows for the next 40 years. It shows that Europe—unlike the US—will face substantial, demographically driven migration pressures from across the Mediterranean for decades to come.
    • Creation Date: 2016-01-01 to 2016-05-31
  21. Data from: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning

    • The kinetic rate constants of four biochemically relevant ligand-receptor systems were estimated and described in a publication. This collection includes input files, output files, trajectories, and statistics associated with the study.
    • Creation Date: 2013-2015
  22. Data from: The Agricultural Productivity Gap

    • Dataset contains data by country for about 150 countries on GDP per capita, employment share in agriculture, value added share in agriculture, agricultural productivity gap, average hours worked, years of schooling, and human capital.
    • Creation Date: 1988-2011,
  23. Data from: The relations between sleep, time of physical activity, and time outdoors among adult women

    • Exploring the relation between physical activity, time spent outdoors and sleep quality and duration.
    • Creation Date: 2012-10-10 to 2014-01-13
  24. Data from: Urbanization-induced habitat fragmentation erodes multiple components of temporal diversity in a Southern California native bee assemblage

    • A dataset of bees and plants in coastal sage scrub reserves and habitat fragments in coastal San Diego County, collected by PhD student Keng-Lou James Hung in 2011 and 2012.
    • Creation Date: 2011-04-12 to 2012-08-13
  25. Data from: Who's Asking? Interviewer Coethnicity Effects in African Survey Data

    • This collection contains the code, data, and output files associated with the article indicated herein.
    • Creation Date: 2012,
  26. dataMares Collection

    • DataMares holds a massive amount of fishery, reef, mangrove, and other data pertaining to the ecology of Mexico, particularly coastal and marine ecosystems of the Gulf of California, and delivers this information in an interactive and digestible manner.
    • Creation Date: 1998 to present
  27. dataMares: Ecological Monitoring

    • This collection contains databases from regular surveys conducted to track annual changes in the structure, function, and health of marine ecosystems, as well as organisms like fishes and invertebrates at numerous island and coastal sites.
    • Creation Date: 1998 to 2015
  28. dataMares: Ecosystem Dynamics

    • The datasets in this collection are used for analyses on relationships between different ecosystems, as well as humans and the habitats surrounding us, to elucidate the impact that anthropogenic activities have on the environment.
    • Creation Date: 2014 to 2016
  29. dataMares: Fisheries

    • This collection contains robust, high-quality scientific information related to Mexico-specific ocean fisheries and their relationship to marine reserves, coastal and marine ecosystems, and climate change. It also contains datasets with information on fishing activities collected with the participation of local fishermen.
    • Creation Date: 1950-01-01 to 2014-08-01,
  30. Heavy Metals in the Ocean Insect, Halobates

    • Data on 7 heavy metals are available from samples of Halobates collected from the Pacific Ocean: Cr (chromium), Cu (copper), Pb (lead), Mn (manganese), Ni (nickel), Ti (titanium) and Zn (zinc).
    • Creation Date: 1961-1978
  31. Keith Rayner Eye Movements in Reading Data Collection

    • This collection consists of data and materials from a subset of published eye movement studies of reading conducted in Keith Rayner’s Eyetracking Lab at UCSD from 2008-2015
    • Creation Date: 2008-2015
  32. Khirbat en-Nahas Project (Jordan)

    • A collection of archaeological artifacts and data for the excavation of the Khirbat en-Nahas site, and exploration of Iron Age state formation in southern Jordan.
    • Creation Date: 2002-2009
  33. Marine background and plume aerosol measurements off the coast of California in July-August 2011 during E-PEACE (Eastern Pacific Emitted Aerosol Cloud Experiment)

    • Measurements of background, generated smoke and cargo ship plume aerosol particles and their chemical and physical properties. Measurements include shipboard measurements near the ocean surface.
    • Creation Date: 12 July 2011 to 18 August 2011,
  34. Measurements of Generated and Ambient Marine Aerosol Particles in August 2012 on board the R/V Ronald H. Brown during the Western Atlantic Climate Study (WACS)

    • Measurements of generated marine aerosol particle physical and chemical properties.
    • Creation Date: 2012-08-19 to 2012-08-27
  35. Measurements of Generated and Ambient Marine Aerosol Particles in May and June 2010 on board the R/V Atlantis during the California Nexus (CalNex) Experiment

    • Measurements of generated marine aerosol particle physical and chemical properties.
    • Creation Date: 2010-05-14 to 2010-06-08,
  36. Santa Fe Light Cone Simulation research project files

    • This project was the result of an ongoing effort by the Laboratory for Computational Astrophysics, leading to development of the Enzo simulation software capable of a seven-level adaptive mesh refinement (AMR) cosmology simulation.
    • Creation Date: 2005-2012
  37. Scripps Institution of Oceanography, Geological Collections

    • A growing archive of sea-floor samples and associated data supporting a diverse variety of scientific research.
    • Creation Date: 1950-2006
  38. Southern Ocean Carbon and Climate Observations and Modeling (SOCCOM) Float Data Archive

    • Biogeochemical profiling floats in the Southern Ocean deployed by the SOCCOM program.
    • Creation Date: 27 March 2014 - present
  39. Stack Gas and Plume Aerosol Measurements from Renewable Diesel and Ultra Low Sulfur Diesel in At-Sea Operation of Research Vessel Robert Gordon Sproul

    • Gas and particle emissions from the R/V Sproul were measured in September 2014 and 2015 using two sets of real-time instruments, with gas analyzers sampling directly from the stack and particle instruments intercepting the “fresh” plume, directly after emission into the atmosphere.
    • Creation Date: 2014-09-29 to 2015-12-05
  40. SWellEx-96 Experiment Acoustic Data

    • SWellEx96 was an ocean acoustic experiment, conducted off San Diego, May 1996. It collected broadband/multitone signals between 50 and 400 Hz on horizontal, vertical, and tilted line arrays.
    • Creation Date: 1996-05-10 to 1996-05-18
  41. Teaching Bee

    • This collection of documents provides teaching exercises and information for instructors of students ranging from junior high school through college.
    • Creation Date: 2005-2013
  42. The Bangarang Project

    • Data associated with the "Bangarang Project", Eric Keen's dissertation study on the foraging ecology of whales in the Kitimat Fjord System, British Columbia.
    • Creation Date: May 2013 - September 2015
  43. Women's Healthy Eating and Living (WHEL) Study

    • The WHEL Study was a multisite, randomized, controlled trial of the effectiveness of a high-vegetable, low-fat diet in reducing additional breast cancer events and early death in women with early-stage invasive breast cancer.
    • Creation Date: 1995 to 2006,