Library Digital Collections

Browse by Collection: UCSD Research Data Collections

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  1. Data from: Electrostatic interactions as mediators in the allosteric activation of PKA RIalpha

    • Molecular dynamics input files, trajectories and analysis scripts used in the paper "Electrostatic interactions as mediators in the allosteric network of PKA RIalpha".
    • Creation Date: 2015-09-15,
  2. Data from: Immersive Visualization and Curation of Archaeological Heritage Data: Çatalhöyük and the Dig@IT App

    • The purpose of this collection is to curate online all the 3D models and related metadata representing the three-dimensional stratigraphy of Çatalhöyük Building 89 as they are disseminated through the open source virtual reality application Dig@IT.
    • Creation Date: 2011-2015,
  3. Data from: Is the Mediterranean the New Rio Grande? U.S. and E.U. Immigration Pressures in the Long Run

    • This project uses a gravity-style model to project bilateral migration flows for the next 40 years. It shows that Europe—unlike the US—will face substantial, demographically driven migration pressures from across the Mediterranean for decades to come.
    • Creation Date: 2016-01-01 to 2016-05-31
  4. Data from: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning

    • The kinetic rate constants of four biochemically relevant ligand-receptor systems were estimated and described in a publication. This collection includes input files, output files, trajectories, and statistics associated with the study.
    • Creation Date: 2013-2015
  5. Data from: The Agricultural Productivity Gap

    • Dataset contains data by country for about 150 countries on GDP per capita, employment share in agriculture, value added share in agriculture, agricultural productivity gap, average hours worked, years of schooling, and human capital.
    • Creation Date: 1988-2011,
  6. Data from: The relations between sleep, time of physical activity, and time outdoors among adult women

    • Exploring the relation between physical activity, time spent outdoors and sleep quality and duration.
    • Creation Date: 2012-10-10 to 2014-01-13
  7. Data from: Urbanization-induced habitat fragmentation erodes multiple components of temporal diversity in a Southern California native bee assemblage

    • A dataset of bees and plants in coastal sage scrub reserves and habitat fragments in coastal San Diego County, collected by PhD student Keng-Lou James Hung in 2011 and 2012.
    • Creation Date: 2011-04-12 to 2012-08-13
  8. Data from: Who's Asking? Interviewer Coethnicity Effects in African Survey Data

    • This collection contains the code, data, and output files associated with the article indicated herein.
    • Creation Date: 2012,
  9. dataMares Collection

    • DataMares holds a massive amount of fishery, reef, mangrove, and other data pertaining to the ecology of Mexico, particularly coastal and marine ecosystems of the Gulf of California, and delivers this information in an interactive and digestible manner.
    • Creation Date: 1998 to present
  10. dataMares: Ecological Monitoring

    • This collection contains databases from regular surveys conducted to track annual changes in the structure, function, and health of marine ecosystems, as well as organisms like fishes and invertebrates at numerous island and coastal sites.
    • Creation Date: 1998 to 2015
  11. dataMares: Ecosystem Dynamics

    • The datasets in this collection are used for analyses on relationships between different ecosystems, as well as humans and the habitats surrounding us, to elucidate the impact that anthropogenic activities have on the environment.
    • Creation Date: 2014 to 2016
  12. dataMares: Fisheries

    • This collection contains robust, high-quality scientific information related to Mexico-specific ocean fisheries and their relationship to marine reserves, coastal and marine ecosystems, and climate change. It also contains datasets with information on fishing activities collected with the participation of local fishermen.
    • Creation Date: 1950-01-01 to 2014-08-01,
  13. Heavy Metals in the Ocean Insect, Halobates

    • Data on 7 heavy metals are available from samples of Halobates collected from the Pacific Ocean: Cr (chromium), Cu (copper), Pb (lead), Mn (manganese), Ni (nickel), Ti (titanium) and Zn (zinc).
    • Creation Date: 1961-1978
  14. Keith Rayner Eye Movements in Reading Data Collection

    • This collection consists of data and materials from a subset of published eye movement studies of reading conducted in Keith Rayner’s Eyetracking Lab at UCSD from 2008-2015
    • Creation Date: 2008-2015
  15. Khirbat en-Nahas Project (Jordan)

    • A collection of archaeological artifacts and data for the excavation of the Khirbat en-Nahas site, and exploration of Iron Age state formation in southern Jordan.
    • Creation Date: 2002-2009
  16. Marine background and plume aerosol measurements off the coast of California in July-August 2011 during E-PEACE (Eastern Pacific Emitted Aerosol Cloud Experiment)

    • Measurements of background, generated smoke and cargo ship plume aerosol particles and their chemical and physical properties. Measurements include shipboard measurements near the ocean surface.
    • Creation Date: 12 July 2011 to 18 August 2011,
  17. Measurements of Generated and Ambient Marine Aerosol Particles in August 2012 on board the R/V Ronald H. Brown during the Western Atlantic Climate Study (WACS)

    • Measurements of generated marine aerosol particle physical and chemical properties.
    • Creation Date: 2012-08-19 to 2012-08-27
  18. Measurements of Generated and Ambient Marine Aerosol Particles in May and June 2010 on board the R/V Atlantis during the California Nexus (CalNex) Experiment

    • Measurements of generated marine aerosol particle physical and chemical properties.
    • Creation Date: 2010-05-14 to 2010-06-08,
  19. Santa Fe Light Cone Simulation research project files

    • This project was the result of an ongoing effort by the Laboratory for Computational Astrophysics, leading to development of the Enzo simulation software capable of a seven-level adaptive mesh refinement (AMR) cosmology simulation.
    • Creation Date: 2005-2012
  20. Scripps CO2 Program Data

    • This collection contains measurements of atmospheric CO2 concentration and isotopic abundances at an array of stations, from the Arctic to Antarctica.
    • Creation Date: 1957 - present