Browse by Collection: UCSD Research Data Collections

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1. 
   Collection

   Data from: Cobble Tracking Observations at Torrey Pines State Beach, CA, USA

   • Wave data and cobble locations at Torrey Pines State Beach, San Diego, California.
   • Date: 2021 to 2023
2. 
   Collection

   Data from: QMrebind: Incorporating quantum mechanical force field reparameterization at the ligand binding site for improved drug-target kinetics through milestoning simulations

   • The data set contains the files necessary to recalculate/reproduce the unbinding rates of ligands for the model host-guest systems and Hsp90-inhibitor complexes in the paper "QMrebind: Incorporating quantum mechanical force field reparameterization at the ligand binding site for improved drug-target kinetics through milestoning simulations."
   • Date: 2021 to 2023
3. 
   Collection

   Data from: Toward Enhanced Reusability: A Comparative Analysis of Metadata for Machine Learning Objects and Their Characteristics in Generalist and Specialist Repositories

   • This dataset contains data reported in the paper, Labou et al. 2023, which aims to understand how researchers are currently documenting machine learning (ML) research outputs for sharing, and the extent to which repository metadata fields enable reuse of ML objects.
   • Date: 2021 to 2023
4. 
   Collection

   Genotype data from Crl:CFW(SW)-US_P08 stock of outbred mice

   • Genotype data for CFW mice for the GWAS for age-related hearing loss.
   • Date: 2021 to present
5. 
   Collection

   The Catalyst at UC San Diego

   • The Catalyst, founded summer of 2021, is an inclusive, open access paper series under the Undergraduate Research Hub at UCSD which aims to empower the voices of students who have a passion for conducting research.
   • Date: 2021 to present
6. 
   Collection

   Virtual Talking Circle Study Data

   • Virtual talking circle study data.
   • Date: 2021
7. 
   Collection

   Data from: Observations and Numerical Simulations of the Onset and Growth of Langmuir Circulations

   • This collection contains data from observations and numerical simulations of Langmuir circulations, along with the relevant routines to generate figures in Andriatis et al. 2024.
   • Date: 2020-11-04 to 2020-11-25
8. 
   Collection

   Data from: Observations of Surface Gravity Wave Spectra from Moving Platforms

   • This collection consists of ocean and atmospheric observations (e.g., waves and winds) collected off the coast of San Diego and San Francisco California from instrumented Boeing Liquid Robotics SV3 Wave Gliders.
   • Date: 2020-09-01 to 2021-11-04
9. 
   Collection

   Data from: Overcrowded Housing Reduces COVID-19 Mitigation Measures and Lowers Emotional Health Among San Diego Refugees from September to November of 2020

   • Data for the present cross-sectional study were collected between September 2020 and November 2020 as part of PANA’s biannual community survey to address the primary research question: What is the association between housing and COVID-19 vulnerability?
   • Date: 2020-09 to 2020-11
10. 
    Collection

    Data from: SEEKR2: Versatile Multiscale Milestoning Utilizing the OpenMM Molecular Dynamics Engine

    • This data set contains the files necessary to recreate the results in the paper "SEEKR2: Versatile Multiscale Milestoning Utilizing the OpenMM Molecular Dynamics Engine".
    • Date: 2020-08 to 2022-03