Browse by Collection: UCSD Research Data Collections
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Collection
Data from: Who's Asking? Interviewer Coethnicity Effects in African Survey Data
- This collection contains the code, data, and output files associated with the article indicated herein.
- Date: 2012
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Collection
Data from: Contrasting Local and Long-Range-Transported Warm Ice-Nucleating Particles During an Atmospheric River in Coastal California, USA
- Data, modeling results and analyses supporting research into meteorology and ice nucleating particles.
- Date: 2016-03-05 to 2018-05-01
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Collection
Data from: Improved Forecast Skill through the Assimilation of Dropsonde Observations from the Atmospheric River Reconnaissance Program
- This dataset are initial and boundary conditions generated by West-WRF implemented at Scripps Institution of Oceanography of UC San Diego for the Atmospheric River Reconnaissance dropsonde data denial experiments described in Zheng et al. 2021 (JGR). With this dataset, one should be able to repeat the WRF simulations for the NoDROP and WithDROP experiments using WRF V3.9.1.1.
- Date: 2016-02-14 to 2019-03-01
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Collection
Data from: Carbon and Oxygen Isotopic Fractionation in the Products of Low-Temperature VUV Photodissociation of Carbon Monoxide
- Carbon and oxygen isotopic fractionation during photodissociation by VUV photons. This Matlab based model only calculates the isotope effect in the self-shielding process and not by any other means (e.g., predissociation). Data files are included.
- Date: 2016 to 2018
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Collection
Data from: Eddy-induced acceleration of Lagrangian floats
- Simulated Argo float positions computed using velocities from the Estimating the Circulation and Climate of the Ocean, Phase II (ECCO2) project.
- Date: 2016 to 2019
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Collection
Data from: Implications of Byproduct Chemistry in Nanoparticle Synthesis
- Absorption spectra of organic byproducts of tetrachloroaurate reduction by 2-(N-morpholino)ethanesulfonate (MES) were calculated via time-dependent density functional theory. These include small organic molecules, organic MES oligomers, and Au(I) complexes.
- Date: 2016 to 2018
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Collection
Data from: Is the Mediterranean the New Rio Grande? U.S. and E.U. Immigration Pressures in the Long Run
- This project uses a gravity-style model to project bilateral migration flows for the next 40 years. It shows that Europe—unlike the US—will face substantial, demographically driven migration pressures from across the Mediterranean for decades to come.
- Date: 2016-01-01 to 2016-05-31
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Data from: Superconductivity Found in Meteorites
- This data details the discovery and analysis of superconducting material in two meteorites. These are the first superconducting materials found in extraterrestrial samples and the superconducting phases are characterized as alloys of lead, tin and indium.
- Date: 2016 to 2019
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Collection
Radiosonde Data Collected During California Storms
- Vertical profiles of temperature, humidity, pressure, and wind speed collected during Atmospheric River events in California (2017-2021).
- Date: 2016 to 2021
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Collection
The CONNected objECT, or CONNECT algorithm applied to National Aeronautics and Space Administration (NASA) Modern-Era Retrospective Analysis for Research and Applications, Version 2 (MERRA V2) - Integrated Water Vapor from 1980 to 2016
- The CONNected objECT (CONNECT) algorithm is applied to global Integrated Water Vapor Transport (IVT) data from the NASA’s Modern-Era Retrospective Analysis for Research and Applications – Version 2 reanalysis product for the period 1980 to 2016.
- Date: 2016
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Collection
Organic and Elemental Composition of Submicron Aerosol Particles during AWARE at McMurdo Station, Antarctica
- Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups and X-ray Fluorescence (XRF) of elements in submicron particles at McMurdo Station, Antarctica.
- Date: 2015-11-29 to 2016-12-19
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Collection
Aerosol Particle Chemical and Physical Measurements on the 2015, 2016, 2017, and 2018 North Atlantic Aerosols and Marine Ecosystems Study (NAAMES) Research Cruises
- Size distributions, organic functional groups, and non-refractory and single particle composition of North Atlantic marine aerosol particles
- Date: 2015-11-06 to 2015-11-30; 2016-05-11 to 2016-06-05; 2017-08-30 to 2017-09-24; 2018-03-20 to 2018-04-13
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Collection
Data from: Measuring Seafloor Strain with an Optical Fiber Interferometer
- A 95.5 day long record of earth strain collected on the seafloor 95 km offshore Oregon was collected (ocean depth was 1910 m). The instrument used was a 200-m-long optical fiber cable, stretched between two anchors in an east-west line.
- Date: 2015-10-24 to 2016-01-27
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Collection
Data from: Observations of Double Diffusive Staircase Edges in the Arctic Ocean
- CTD profiles collected in the Canada Basin with a Shallow Water Integrated Mapping System (SWIMS).
- Date: 2015-09-18 to 2015-09-20
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Collection
Data from: Electrostatic interactions as mediators in the allosteric activation of PKA RIalpha
- Molecular dynamics input files, trajectories and analysis scripts used in the paper "Electrostatic interactions as mediators in the allosteric network of PKA RIalpha".
- Date: 2015-09-15
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Collection
Data from: Drift-Corrected Seafloor Vertical Deformation at Axial Seamount 2013-2014
- Data from a Self-Calibrating Pressure Recorder (SCPR) deployed at Axial Seamount from 2013 to 2015. This is seafloor height change (cm), converted from pressure (kPa), corrected for ocean tides and pressure gauge drift.
- Date: 2015-08-25
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Collection
Data from: Airborne observations of shoaling and breaking internal waves
- This collection contains data presented in: "Airborne observations of shoaling and breaking internal waves." This includes a mosaic of sea surface temperature, spectral analysis of temperature structures, surface velocities, and areas undergoing breaking.
- Date: 2015-08-01
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Collection
Research based PAM50 Signature from the Women's Healthy Eating and Living (WHEL) Study
- PAM50 subtype calls, ROR risk groups and scores are provided.
- Date: 2015-07-29 to 2015-11-06
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Collection
An annotated checklist of the bees (Hymenoptera: Anthophila) of San Diego County, California
- This database represents an ongoing survey to document all the bee species that occur within the bounds of San Diego County. As this project is still ongoing, the database will be updated periodically with additions and/or corrections.
- Date: July 2015 to August 2020
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Collection
Lawrence Livermore National Laboratory (LLNL) Open Data Initiative
- Lawrence Livermore National Laboratory’s Data Science Institute shares some of LLNL’s challenging and unique data sets with the larger data science community through its Open Data Initiative.
- Date: July 2015 to present
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Collection
EarthCube User Scenario Collection
- A collection of earth scientists' descriptions of their cyberinfrastructure needs, developed for the NSF EarthCube program.
- Date: 2015-05-01 to 2016-09-01
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Collection
Data from: Quantifying influence of human choice on the automated detection of Drosophila behavior by a supervised machine learning algorithm
- This data collection contains original movie files, files derived from a tracking program (FlyTracker) and a machine learning-based behavioral classification suite (JAABA), and behavior classifiers for Drosophila social behaviors. These constitute source data of our publication (Leng, X., et al., 2020, in press). With our custom codes (available at https://github.com/asahinak/Leng_Wohl_etal_2020_JAABA_vs_human_annotation), readers can reproduce all the results presented in the article.
- Date: 2015-03 to 2018-09
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Collection
Data from: A Living Vector Field Reveals Constraints on Galactose Network Induction in Yeast
- To study how cellular traits produce population phenotypes, we built living vector fields from single-cell timecourses of the proteins Gal3p and Gal1p as yeast switched to galactose from other nutrients. This collection has data and analysis codes.
- Date: 2015 to 2016
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Collection
Data from: Building Cultural Heritage Resilience through Remote Sensing: An Integrated Approach using Multi-temporal Site Monitoring, Datafication, and Web-GL Visualization
- This collection integrates highly accurate 3D snapshots of Bodie's historic buildings before/after disturbance, or post-restoration, and other 3D geospatial data that were used to monitor and digitally preserve important cultural resources at Bodie California State Historic Park.
- Date: 2015 and 2020
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Collection
Data from: Episodic Southern Ocean heat loss and its mixed layer impacts revealed by the furthest south multi-year surface flux mooring
- This dataset contains Quality Controlled daily mean air-sea heat flux estimates from the NSF Ocean Observatories Initiative Southern Ocean mooring site for the period 2015 to 2017, as used in the analysis of Ogle et al. 2018 (doi:10.1029/2017GL076909)
- Date: 2015 to 2017
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Collection
Data from: Internal tide structure and temporal variability on the reflective continental slope of southeastern Tasmania
- This collection contains in situ data (from 3 moorings and 1 CTD/LADCP station) from the Tasman Tidal Dissipation Experiment (T-TIDE) that was analyzed in Marques et al. (2020).
- Date: From 2015-01 to 2015-03
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Collection
Data from: Observations and Modeling of Ocean Circulation in the Seychelles Plateau Region
- This collection contains raw and processed data from a variety of velocity, pressure, temperature and salinity sensors deployed from December 2016 to March 2019 over the Seychelles Plateau and a subset of an Ocean General Circulation POP model from the South Tropical Indian Ocean.
- Date: Data: 2015 to 2019; Model: 1993 to 2009
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Collection
Data from: Observations of Tidally Driven Turbulence over Steep, Small-scale Topography Embedded in the Tasman Slope
- In-situ observations from the Tasman Tidal Dissipation Experiment (TTIDE) collected around a small-scale bump embedded in the continental slope of Tasmania.
- Date: 2015-01 to 2015-03
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Collection
Data from: Southern California Coastal Response to the 2015-16 El Niño
- Airborne lidar datasets collected on 6-October-2015 and 22-March-2016, and processed into 1-m resolution digital elevation models.
- Date: 2015 to 2016
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Collection
Data from: Subaerial Profiles at Two Beaches: Equilibrium and Machine Learning
- This collection contains observations of beach elevation and model derived wave statistics from two locations in San Diego County: Torrey Pines State Beach and Black’s Beach (La Jolla, CA).
- Date: 2015-01 to 2023-12
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Collection
Native bees in San Diego's coastal sage scrub reserves and fragments, surveyed in 2015 and 2016
- A dataset of bees and plants in coastal sage scrub reserves and habitat fragments in coastal San Diego County, collected by PhD student Keng-Lou James Hung in 2015 and 2016.
- Date: 2015 to 2016
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Collection
Plant-pollinator interaction networks in coastal sage scrub reserves and fragments in San Diego
- Data here describe the interactions between plants and putative pollinators in large natural reserves (area > 500 ha; n = 6) and small habitat fragments (area < 60 ha; n = 6) of coastal sage scrub habitat.
- Date: 2015 to 2016
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The Cross-Surfzone/Inner-shelf Dye Exchange (CSIDE) Study
- Observational data and analysis from the NSF-funded Cross-Surfzone/Inner-shelf Dye Exchange (CSIDE) Study.
- Date: 2015
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Collection
Training image data for: Environmental and ecological drivers of harmful algal blooms in the Southern California Bight
- The datasets include example images of marine protists and copepods. The images were collected by the Scripps Plankton Camera (http://spc.ucsd.edu/), located at the end of the Scripps Pier, La Jolla, CA, at the tide-dependent depth of approximately 3-4 m.
- Date: 2015 to 2019
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Collection
Aerosol Composition and Size Measurements at Fresno and Fontana
- Non-refractory aerosol particle and refractory black carbon mass concentrations, size distributions, and coatings along with single particle compositions and organic aerosol functional groups in Fresno and Fontana.
- Date: 2014-12-19 to 2015-01-13 (Fresno); 2015-07-04 to 2015-07-28 (Fontana)
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Collection
Stack Gas and Plume Aerosol Measurements from Renewable Diesel and Ultra Low Sulfur Diesel in At-Sea Operation of Research Vessel Robert Gordon Sproul
- Gas and particle emissions from the R/V Sproul were measured in September 2014 and 2015 using two sets of real-time instruments, with gas analyzers sampling directly from the stack and particle instruments intercepting the “fresh” plume, directly after emission into the atmosphere.
- Date: 2014-09-29 to 2015-12-05
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Collection
Data from: Allostery through the Computational Microscope: cAMP Activation of a Canonical Signalling Domain
- This collection contains the molecular dynamics trajectories scripts and models used in the paper “Allostery through the computational microscope: cAMP activation of a canonical signalling domain”.
- Date: 2014-08-24
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Collection
Ambient and Sea Sweep Generated Aerosol Measurements in the North Atlantic in May-June 2014 during WACS2 (Western Atlantic Climate Study 2)
- Measurements of ambient and seawater generated marine aerosol particle chemical and physical properties in the North Atlantic in May-June 2014.
- Date: 2014-05-20 to 2014-06-05
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Collection
Southern Ocean Carbon and Climate Observations and Modeling (SOCCOM) and Global Ocean Biogeochemistry (GO-BGC) Biogeochemical-Argo Float Data Archive
- Data from biogeochemical Argo profiling floats within the SOCCOM and GO-BGC programs. Additional floats outside of these programs may also be included, provided their data-streams are managed by the Monterey Bay Aquarium Research Institute (MBARI).
- Date: 2014-03-27 to present
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Collection
Southern Ocean Carbon and Climate Observations and Modeling (SOCCOM) Float Data Archive
- Biogeochemical profiling floats in the Southern Ocean deployed by the SOCCOM program.
- Date: 2014-03-27 to 2022-05-19
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Collection
California Local Tax Ballot Measures
- Public records associated with most of the local tax measures put before California voters since 1986, including excerpts from official voter information guides and sample ballots, and proposed ordinance text, where available.
- Date: 2014 to 2020
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Collection
Data from: Calibrated absolute seafloor pressure measurements for geodesy in Cascadia
- Raw and corrected pressure data from campaign-style surveys of absolute calibrated sea pressure using an Absolute Self-Calibrating Pressure Recorder (ASCPR) in the Cascadia subduction zone from 2014 to 2017.
- Date: 2014 to 2017
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Collection
Data from: Climate change intensification of horizontal water vapor transport in CMIP5
- The dataset contains simulations of water vapor transport from 22 CMIP5 models including the historical, RCP4.5, and RCP8.5 runs.
- Date: 2014 to 2015
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Collection
Data from: Effect of atmospheric forcing resolution on simulated mixed layer depth in the North Pacific
- This dataset contains daily output from two eddying ocean simulations in the North Pacific. The two experiments have the same configuration except for the atmospheric forcing resolution.
- Date: 2014 to 2018
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Collection
dataMares: Ecosystem Dynamics
- The datasets in this collection are used for analyses on relationships between different ecosystems, as well as humans and the habitats surrounding us, to elucidate the impact that anthropogenic activities have on the environment.
- Date: 2014 to present
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Genotype data from: NIDA Center for GWAS in Outbred rats
- This collection contains genotype data collected as part of the NIDA Center for GWAS in Outbred rats and more than 10 additional research projects that use N/NIH heterogeneous stock (HS) outbred rats.
- Date: 2014 to present
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Collection
The Center for GWAS in Outbred Rats Database (C-GORD)
- C-GORD (The Center for GWAS in Outbred Rats Database) provides access to the data generated by the NIDA center for genetic studies of drug abuse and other behaviors as well as physiological phenotypes in N/NIH heterogeneous stock (HS) rats; the data is collected by more than 15 research projects.
- Date: 2014 to present
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Autonomous Underwater Vehicle (AUV)-borne velocity measurements collected over a fringing coral reef near Makua Beach, Oahu, Hawai'i
- This collection contains raw data from a REMUS-100 Autonomous Underwater Vehicle (AUV) deployed in September 2013 over a fringing coral reef near Makua Beach, Oahu, Hawai'i.
- Date: 2013-09-06 to 2013-09-08
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Collection
Oceanographic data taken over a fringing coral reef near Makua Beach, Oahu, Hawai'i (2013)
- Raw and averaged velocity, temperature, salinity, and pressure data from a coral reef in southwestern Oahu, Hawai'i.
- Date: 2013-09-06 to 2013-09-30
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Collection
Carbonaceous Aerosol Particle Measurements from Southeast Atmosphere Study (SOAS) 2013 in Look Rock, Tennessee, USA
- HR-Tof-AMS submicon mass spectra for ensemable mass and single paritcles (by LS), Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups of submicron particles,and size distributions at Look Rock during SOAS 2013.
- Date: 2013-06-01 to 2013-07-18