Browse by Collection: UCSD Research Data Collections

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1. 
   Collection

   Supplemental large-area imaging data from: Groundtruthing assessments of lab-based coral thermal tolerance with large-area imaging

   • This collection includes the supplemental large-area imaging (LAI) data from a study conducted on three reefs in southern Taiwan with different thermal histories. The study compared in-situ LAI monitoring with ex-situ experiments with the goal of groundtruthing the experimental results.
   • Date: 2022-04-20 to 2022-09-23
2. 
   Collection

   Hornsund Fjord 2023: Broadband Active Acoustic and Oceanographic Data

   • This is a data set containing broadband active acoustic and oceanographic data collected in Hornsund Fjord, Svalbard.
   • Date: 2023-07-07 to 2023-07-12
3. 
   Collection

   Data from: A new method for diagnosing effective radiative forcing from aerosol-cloud interactions in climate models

   • This dataset includes a new method for estimating shortwave ERFaci from liquid clouds using cloud radiative kernels and MODIS joint histograms, offering insights into the Twomey effect, liquid water path, and cloud fraction adjustments.
   • Date: 2024
4. 
   Collection

   Faces of select bees from San Diego, CA

   • A collection of photographs featuring the faces of bees from San Diego, CA, showcasing the diversity of native bees inhabiting Southern California's bee biodiversity hotspot.
   • Date: 2011 to 2014
5. 
   Collection

   Data from: Subaerial Profiles at Two Beaches: Equilibrium and Machine Learning

   • This collection contains observations of beach elevation and model derived wave statistics from two locations in San Diego County: Torrey Pines State Beach and Black’s Beach (La Jolla, CA).
   • Date: 2015-01 to 2023-12
6. 
   Collection

   Green New Deal at UC San Diego

   • A collection of documents and other media recording the campaigns of the Green New Deal at UC San Diego, a grassroots climate justice organization that successfully lobbied the UC to transform its climate change policies.
   • Date: 2019 to 2024
7. 
   Collection

   Data from: Genuine Carbene Versus Carbene-Like Reactivity

   • Optimized geometries, frequencies, and single point calculations for reactants, products, reaction intermediates, and transition states involved in forming cyclic(aryl)(amino)carbene-metal complexes and decomposition products.
   • Date: 2023-04 to 2023-11
8. 
   Collection

   The Catalyst at UC San Diego

   • The Catalyst, founded summer of 2021, is an inclusive, open access paper series under the Undergraduate Research Hub at UCSD which aims to empower the voices of students who have a passion for conducting research.
   • Date: 2021 to present
9. 
   Collection

   California Proposition 56 Evaluation

   • This collection includes biennial and technical reports assessing changes in tobacco-related indicators for California’s populations pre-and post-Proposition 56.
   • Date: 2022-07-01 to present
10. 
    Collection

    Data from: Quantifying Bioluminescent Light Intensity in Breaking Waves using Numerical Simulations

    • This collection features velocity, volume fraction, and velocity gradient data interpolated onto a uniform Cartesian grid, along with Basilisk code for simulating breaking waves and Julia code for simulating bioluminescence.
    • Date: 2024
11. 
    Collection

    California American Indian Tobacco Initiative Evaluation (CAITIE)

    • This collection includes reports, dissemination materials, methodological materials, and data associated with the the California American Indian Tobacco Initiative Evaluation (CAITIE).
    • Date: 2019
12. 
    Collection

    Data from: Multiscale Modeling Shows How 2'-deoxy-ATP Rescues Ventricular Function in Heart Failure

    • Molecular dynamics simulations of myosin (1QVI) carried out with either ATP or dATP bound from the manuscript "Multiscale modeling shows how 2'-deoxy-ATP rescues ventricular function in heart failure"
    • Date: 2020 to 2022
13. 
    Collection

    Data from: Prediction of Threonine-Tyrosine Kinase Receptor-Ligand Unbinding Kinetics with Multiscale Milestoning and Metadynamics

    • Heat shock protein 90 (HSP90) and threonine tyrosine kinase (TTK) simulation enabled estimation of kinetic rates (SEEKR) calculations using both steered molecular dynamics and metadynamics.
    • Date: 2022-05 to 2024-06
14. 
    Collection

    Measurements and Analysis Products from Baselining the Indirect Effect by Improving Quantification of Sea Spray and Marine Sources at Ascension Island during LASIC

    • This collection provides data and codes used to retrieve aerosol mode fitting parameters, Hoppel minimum diameters from measured particle size distributions, cloud supersaturations, and cloud microphysical properties during the ARM LASIC campaign.
    • Date: 2020 to 2024
15. 
    Collection

    Data from: Observations and Numerical Simulations of the Onset and Growth of Langmuir Circulations

    • This collection contains data from observations and numerical simulations of Langmuir circulations, along with the relevant routines to generate figures in Andriatis et al. 2024.
    • Date: 2020-11-04 to 2020-11-25
16. 
    Collection

    Data from: Characterizing Non-phase-locked Tidal Currents in the California Current System using High-frequency Radar

    • Processed time series from HFR, power spectra from HFR, and fitted harmonic constituents from analyzed HFR. Data from a bottom pressure sensor used in suppl. Scripts used in the study to analyze and process data and to make visualizations.
    • Date: 2012-01-01 to 2021-04-01
17. 
    Collection

    Data from: NetSci: A Library for High Performance Biomolecular Simulation Network Analysis Computation

    • This collection contains trajectory and molecular dynamics simulation output data for NetSci: A Library for High Performance Biomolecular Simulation Network Analysis Computation.
    • Date: 2022-01-01 to 2024-04-01
18. 
    Collection

    San Diego County GIS Data

    • This collection contains GIS or geospatial data for San Diego County. Datasets were originaly acquired from the SanGIS and SANDAG Regional Data Warehouse and the San Diego Open Data Portal.
    • Date: 1986 to present
19. 
    Collection

    Genotype data from Crl:CFW(SW)-US_P08 stock of outbred mice

    • Genotype data for CFW mice for the GWAS for age-related hearing loss.
    • Date: 2021 to present
20. 
    Collection

    Data from: Sensitivities of the West Greenland Current to Greenland Ice Sheet Meltwater in a Mesoscale Ocean/Sea Ice Model

    • Diagnostics from a high-resolution global coupled ocean/sea-ice (POP/CICE5) simulations. Diagnostics are calculated based on 1992-1993 for three meltwater forcing experiments: a control run, surface forcing, and spread forcing.
    • Date: Model creation: 2016 to 2023. Model representation: 1992 to 1993