Browse by Collection: UCSD Research Data Collections

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1. 
   Collection

   Measurements of Generated and Ambient Marine Aerosol Particles in May and June 2010 on board the R/V Atlantis during the California Nexus (CalNex) Experiment

   • Measurements of generated marine aerosol particle physical and chemical properties.
   • Date: 2010-05-14 to 2010-06-08
2. 
   Collection

   dataMares: Ecological Monitoring

   • This collection contains databases from regular surveys conducted to track annual changes in the structure, function, and health of marine ecosystems, as well as organisms like fishes and invertebrates at numerous island and coastal sites.
   • Date: 1998 to present
3. 
   Collection

   Aerosol and Cloud Observations in La Jolla, CA, in May-June 2011 during SOLEDAD (Stratocumulus Observations of Los-Angeles Emissions Derived Aerosol-Droplets)

   • Measurements of polluted marine aerosol and cloud droplet chemical and physical properties at Mt. Soledad and Scripps Pier in La Jolla, California.
   • Date: 2012-05-01 to 2012-06-18
4. 
   Collection

   Marine background and plume aerosol measurements off the coast of California in July-August 2011 during E-PEACE (Eastern Pacific Emitted Aerosol Cloud Experiment)

   • Measurements of background, generated smoke and cargo ship plume aerosol particles and their chemical and physical properties. Measurements include shipboard measurements near the ocean surface.
   • Date: 2011-07-12 to 2011-08-18
5. 
   Collection

   Aerosol Composition and Size Measurements at Fresno and Fontana

   • Non-refractory aerosol particle and refractory black carbon mass concentrations, size distributions, and coatings along with single particle compositions and organic aerosol functional groups in Fresno and Fontana.
   • Date: 2014-12-19 to 2015-01-13 (Fresno); 2015-07-04 to 2015-07-28 (Fontana)
6. 
   Collection

   dataMares: Ecosystem Dynamics

   • The datasets in this collection are used for analyses on relationships between different ecosystems, as well as humans and the habitats surrounding us, to elucidate the impact that anthropogenic activities have on the environment.
   • Date: 2014 to present
7. 
   Collection

   Carbonaceous Aerosol Particle Measurements from Southeast Atmosphere Study (SOAS) 2013 in Look Rock, Tennessee, USA

   • HR-Tof-AMS submicon mass spectra for ensemable mass and single paritcles (by LS), Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups of submicron particles,and size distributions at Look Rock during SOAS 2013.
   • Date: 2013-06-01 to 2013-07-18
8. 
   Collection

   Data from: Drift-Corrected Seafloor Vertical Deformation at Axial Seamount 2013-2014

   • Data from a Self-Calibrating Pressure Recorder (SCPR) deployed at Axial Seamount from 2013 to 2015. This is seafloor height change (cm), converted from pressure (kPa), corrected for ocean tides and pressure gauge drift.
   • Date: 2015-08-25
9. 
   Collection

   Southern Ocean Carbon and Climate Observations and Modeling (SOCCOM) Float Data Archive

   • Biogeochemical profiling floats in the Southern Ocean deployed by the SOCCOM program.
   • Date: 2014-03-27 to 2022-05-19
10. 
    Collection

    Data from: Electrostatic interactions as mediators in the allosteric activation of PKA RIalpha

    • Molecular dynamics input files, trajectories and analysis scripts used in the paper "Electrostatic interactions as mediators in the allosteric network of PKA RIalpha".
    • Date: 2015-09-15
11. 
    Collection

    Data from: A Living Vector Field Reveals Constraints on Galactose Network Induction in Yeast

    • To study how cellular traits produce population phenotypes, we built living vector fields from single-cell timecourses of the proteins Gal3p and Gal1p as yeast switched to galactose from other nutrients. This collection has data and analysis codes.
    • Date: 2015 to 2016
12. 
    Collection

    The Bangarang Project

    • Data associated with the "Bangarang Project", Eric Keen's dissertation study on the foraging ecology of whales in the Kitimat Fjord System, British Columbia.
    • Date: 2013-05 to 2015-09
13. 
    Collection

    Data from: 'Whale Wave': shifting strategies structure the complex use of critical fjord habitat by humpbacks

    • This collection contains the data, R programming files, and detailed protocols for various aspects of analysis for the publication: Keen et al. 2016. "Whale Wave": shifting strategies structure the complex use of critical fjord habitat by humpbacks.
    • Date: 2005 to 2015
14. 
    Collection

    Cell Centered Database

    • A collection of high resolution 2D, 3D and 4D data from light and electron microscopy of tissues from the nervous system and other systems.
    • Date: 1986 to 2012
15. 
    Collection

    California Smokers Cohort (CSC)

    • The objective of this survey was to collect statewide data on tobacco-related behaviors, knowledge of and attitudes towards smoking, and monitoring the effect of State-initiated programs on individual target populations.
    • Date: 2011 to 2012
16. 
    Collection

    Data from: Urbanization-induced habitat fragmentation erodes multiple components of temporal diversity in a Southern California native bee assemblage

    • A dataset of bees and plants in coastal sage scrub reserves and habitat fragments in coastal San Diego County, collected by PhD student Keng-Lou James Hung in 2011 and 2012.
    • Date: 2011-04-12 to 2012-08-13
17. 
    Collection

    Stack Gas and Plume Aerosol Measurements from Renewable Diesel and Ultra Low Sulfur Diesel in At-Sea Operation of Research Vessel Robert Gordon Sproul

    • Gas and particle emissions from the R/V Sproul were measured in September 2014 and 2015 using two sets of real-time instruments, with gas analyzers sampling directly from the stack and particle instruments intercepting the “fresh” plume, directly after emission into the atmosphere.
    • Date: 2014-09-29 to 2015-12-05
18. 
    Collection

    Data from: Is the Mediterranean the New Rio Grande? U.S. and E.U. Immigration Pressures in the Long Run

    • This project uses a gravity-style model to project bilateral migration flows for the next 40 years. It shows that Europe—unlike the US—will face substantial, demographically driven migration pressures from across the Mediterranean for decades to come.
    • Date: 2016-01-01 to 2016-05-31
19. 
    Collection

    Data from: The Agricultural Productivity Gap

    • Dataset contains data by country for about 150 countries on GDP per capita, employment share in agriculture, value added share in agriculture, agricultural productivity gap, average hours worked, years of schooling, and human capital.
    • Date: 1988 to 2011
20. 
    Collection

    CAVEcam Virtual Reality Photography Collection

    • Full-surround 3-D images make up this collection of original and rendered composite images called CAVEcams which are very high-resolution images for both left and right eye, normally viewed in virtual reality systems, either CAVEs or HMDs.
    • Date: 2009 to 2016
21. 
    Collection

    Data from: Who's Asking? Interviewer Coethnicity Effects in African Survey Data

    • This collection contains the code, data, and output files associated with the article indicated herein.
    • Date: 2012
22. 
    Collection

    California Cooperative Oceanic Fisheries Investigations (CalCOFI): Acoustic and Trawl Data

    • This is a voluminous data set containing acoustic and trawl data collected on CalCOFI (California Cooperative Oceanic Fisheries Investigations) cruises.
    • Date: 2009 to 2015
23. 
    Collection

    dataMares: Fisheries

    • This collection contains robust, high-quality scientific information related to Mexico-specific ocean fisheries and their relationship to marine reserves, coastal and marine ecosystems, and climate change. It also contains datasets with information on fishing activities collected with the participation of local fishermen.
    • Date: 1950-01-01 to present
24. 
    Collection

    dataMares Collection

    • DataMares holds a massive amount of fishery, reef, mangrove, and other data pertaining to the ecology of Mexico, particularly coastal and marine ecosystems of the Gulf of California, and delivers this information in an interactive and digestible manner.
    • Date: 1998 to present
25. 
    Collection

    Carbonaceous Aerosol Particle Measurements from Cal-Mex 2010 in Tijuana, Mexico

    • Single Particle Soot Photometer (SP2) measurements of aerosol refractory black carbon (BC) content for individual particles and Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups of submicron particles at Parque Morelos during Cal-Mex 2010 from 15 May to 30 June.
    • Date: 2010-05-15 to 2010-06-30
26. 
    Collection

    Women's Healthy Eating and Living (WHEL) Study

    • The WHEL Study was a multisite, randomized, controlled trial of the effectiveness of a high-vegetable, low-fat diet in reducing additional breast cancer events and early death in women with early-stage invasive breast cancer.
    • Date: 1995 to 2006
27. 
    Collection

    Keith Rayner Eye Movements in Reading Data Collection

    • This collection consists of data and materials from a subset of published eye movement studies of reading conducted in Keith Rayner’s Eyetracking Lab at UCSD from 2008-2015
    • Date: 2008 to 2015
28. 
    Collection

    An annotated checklist of the bees (Hymenoptera: Anthophila) of San Diego County, California

    • This database represents an ongoing survey to document all the bee species that occur within the bounds of San Diego County. As this project is still ongoing, the database will be updated periodically with additions and/or corrections.
    • Date: July 2015 to August 2020
29. 
    Collection

    Data from: Allostery through the Computational Microscope: cAMP Activation of a Canonical Signalling Domain

    • This collection contains the molecular dynamics trajectories scripts and models used in the paper “Allostery through the computational microscope: cAMP activation of a canonical signalling domain”.
    • Date: 2014-08-24
30. 
    Collection

    Data from: Carbonic Anhydrases, EPF2 and a Novel Protease Mediate CO2 Control of Stomatal Development

    • RNA-Seq experiments analyzing the Arabidopsis response to low and elevated carbon dioxide growing conditions were conducted to capture early signaling events as seedlings were adapting to stress.
    • Date: 2012 to 2013
31. 
    Collection

    Data from: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning

    • The kinetic rate constants of four biochemically relevant ligand-receptor systems were estimated and described in a publication. This collection includes input files, output files, trajectories, and statistics associated with the study.
    • Date: 2013 to 2015
32. 
    Collection

    Heavy Metals in the Ocean Insect, Halobates

    • Data on 7 heavy metals are available from samples of Halobates collected from the Pacific Ocean: Cr (chromium), Cu (copper), Pb (lead), Mn (manganese), Ni (nickel), Ti (titanium) and Zn (zinc).
    • Date: 1961 to 1978
33. 
    Collection

    SWellEx-96 Experiment Acoustic Data

    • SWellEx96 was an ocean acoustic experiment, conducted off San Diego, May 1996. It collected broadband/multitone signals between 50 and 400 Hz on horizontal, vertical, and tilted line arrays.
    • Date: 1996-05-10 to 1996-05-18
34. 
    Collection

    California Tobacco Survey (CTS)

    • The objective of these surveys is to collect representative statewide data on cigarette smoking behavior, attitudes towards smoking, media exposure to smoking, and use of tobacco products other than cigarettes, from populations living in California.
    • Date: 1990 to 2011
35. 
    Collection

    Bee Research Methods: Video Demonstrations

    • This collection shows bee behaviors and methods used to study bee behaviors.
    • Date: 2005 to 2014
36. 
    Collection

    Teaching Bee

    • This collection of documents provides teaching exercises and information for instructors of students ranging from junior high school through college.
    • Date: 2005 to 2013
37. 
    Collection

    Khirbat en-Nahas Project (Jordan)

    • A collection of archaeological artifacts and data for the excavation of the Khirbat en-Nahas site, and exploration of Iron Age state formation in southern Jordan.
    • Date: 2002 to 2009
38. 
    Collection

    Scripps Institution of Oceanography, Geological Collections

    • A growing archive of sea-floor samples and associated data supporting a diverse variety of scientific research.
    • Date: 1950 to 2006
39. 
    Collection

    Santa Fe Light Cone Simulation research project files

    • This project was the result of an ongoing effort by the Laboratory for Computational Astrophysics, leading to development of the Enzo simulation software capable of a seven-level adaptive mesh refinement (AMR) cosmology simulation.
    • Date: 2005 to 2012