Browse by Collection: UCSD Research Data Collections
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CollectionA dataset of chromosomal instability gene signature scores in normal and cancer cells from the human breast
- These data show the relative amount of chromosomal instability (CIN) in a diverse array of human breast cell types, including non-transformed mammary epithelial cells as well as cancer cell lines. Additional data is also provided from human embryonic and mesenchymal stem cells.
- Date: 2018 to 2023
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CollectionData from: Cusp and mega cusp observations on a mixed sediment beach
- The dataset contains elevation rasters and gravel/cobble locations (North American Datum of 1983 (NAD 83), North American Vertical Datum of 1988 (NAVD 88)).
- Date: 2018 to 2019
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CollectionData from: Four Atmospheric Circulation Regimes Over the North Pacific and Their Relationship to California Precipitation on Daily to Seasonal Timescales
- This dataset contains four indices of daily atmospheric variability associated with four circulation regimes over the North Pacific, which have been identified as essential drivers of atmospheric river landfall variability and California precipitation.
- Date: 2018
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CollectionData from: Lineage tracing shows that cell size asymmetries predict the dorsoventral axis in the sea star embryo
- Microscopy data relative to measurements of cell sizes in early embryos of 3 echinoderm species (Patiria miniata, Lytechinus pictus and Patiriella regularis) and to lineage tracing experiments in the sea star Patiria miniata.
- Date: 2018 to 2022
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CollectionData from: The Oceanic Barrier Layer in the Eastern Indian Ocean as a Predictor for Rainfall over Indonesia and Australia
- This collection consists of E3SMv0 model and variety of observational data and scripts in support of relevant manuscript focused on the relationship of the barrier layer in a region West of Sumatra and the terrestrial rainfall over Indonesia and Australia.
- Date: 2018 to 2020
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CollectionData from: Towards Implementing AI Post-processing in Weather and Climate: Proposed Actions from the Oxford 2019 Workshop
- We present an open-access experimental testbed database of clean weather and climate data on which traditional methods have been implemented, in order to set benchmarking points for the rapid development of new machine learning methods.
- Date: 2018 to 2020
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CollectionGlobal Navigation Satellite System (GNSS) Airborne Radio Occultation (ARO) Observations from the Atmospheric River Reconnaissance Field Campaigns
- Airborne radio occultation (ARO) observations were retrieved from the research aircraft (NOAA G-IV and AFRC WC-130s) deployed in the atmospheric river reconnaissance campaigns. The research flights were conducted over a wide area over the Pacific, from the US west coast to Guam.
- Date: 2018 to present
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CollectionCalifornia Cooperative Oceanic Fisheries Investigations (CalCOFI): Acoustic Fisheries Data (2017- )
- Non-calibrated multi-frequency acoustic fisheries data (.raw files) collected aboard RV Sally Ride on the November 2017 CalCOFI (California Cooperative Fisheries Investigations) cruise
- Date: 2017-11-09 to 2017-11-24
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CollectionData from: Quantitative regional observations of the geological influence on primary sandy beaches
- The dataset includes mapped beach elevations, and gravel/bedrock locations in GeoTIFF format.
- Date: 2017-10-01 to 2021-03-31
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CollectionData from: Psychometric Evaluation of the Verbal List Learning Task with Food Words (VLLT-Food)
- Data collected from participants completing two versions of a verbal list learning task to evaluate whether modifying the stimuli impacted performance.
- Date: 2017-08 to 2018-05
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CollectionObservations and Model Simulations from the Inner-Shelf Dynamics Experiment (ISDE)
- In-situ observations and model simulations from the Inner-Shelf Dynamics Experiment (ISDE)
- Date: August 2017 to December 2017
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CollectionData from: Exploration and Explanation in Computational Notebooks
- Analysis of approximately 1.25 million Jupyter Notebooks downloaded from public repositories on GitHub in July 2017.
- Date: July 2017
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CollectionFlat Panel Impact and Residual Strength Testing and Characterization by Ultrasonic and X-Ray Computed Tomography Non-Destructive Evaluation
- Flat composite panel impacts and residual strength testing. Impact damage characterized by X-ray computed tomography and ultrasonic scanning and residual strength testing characterized by digital image correlation.
- Date: 2017-07 to 2017-09
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CollectionData from: Observing Ocean-Atmosphere Fluxes From Autonomous Surface Vehicles
- This collection contains raw and processed data collected from the Research platform FLIP and by two Wave Gliders during the ONR funded Langmuir Cell DRI experiment conducted in Spring 2017 off the coast of Southern California.
- Date: 2017-03-21 to 2017-04-06
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CollectionData from: Harnessing AI data-driven global weather models for climate attribution: An analysis of the 2017 Oroville Dam extreme atmospheric river
- This study explores storyline-based climate attribution with AI global weather models, whose short simulation inference times allow one to generate real-time attributions when public attention is heightened. It focuses on the atmospheric river episode of February 2017 that contributed to the Oroville Dam spillway incident in Northern California. Attributions are compared to those from a dynamical model, which represent a plausible "pseudo-reality". This collection contains the data used and generated in the aforementioned study.
- Date: 2017-02-05 to 2017-02-11
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CollectionCenter for Western Weather and Water Extremes (CW3E) Surface Meteorological Observational Dataset
- CW3E Surface Meteorological Observational Dataset: temperature, relative humidity, pressure, precipitation, and soil moisture and temperature at six levels collected every 2 minutes, from 11 stations in the Russian, Yuba, Feather, and Prado watersheds.
- Date: 2017 to present
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CollectionData from: A Glimpse through Time and Space: Visualizing Spatial Continuity and History-making at Çatalhöyük, Turkey
- This collection includes 3-D models, derived 3-D renders, Unity 3D asset packages, a Win64 3-D app, and related metadata that reconstruct both spatially and temporally (4-D) the ‘Shrine’ 10 sequence at the Neolithic site of Çatalhöyük, Turkey
- Date: 2017 to 2019
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CollectionData from: Arctic ice-ocean interactions in an 8-to-2 kilometer resolution global model
- This data collection represents all UH8to2 model data used for the publication "Arctic ice-ocean interactions in an 8-to-2 kilometer resolution global model". This includes ocean and sea ice characteristics from the 2017-2020 UH8to2 model run.
- Date: Model representation: 2017 to 2020
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CollectionData from: Continuous Evaluation of Ligand Protein Predictions: A Weekly Community Challenge for Drug Docking
- All structures and RMSDs used in Continuous Evaluation of Ligand Protein Predictions: A Weekly Community Challenge for Drug Docking are provided here.
- Date: 2017 to 2018
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CollectionData from: Increasing STEM Undergraduate Participation in Innovative Activities: Field Experimental Evidence
- Measures of performance on an innovation contest by whether or not participants receive randomized encouragement, and whether participants self-selected into the contest or joined after receiving a monetary inducement for doing so.
- Date: 2017-01 to 2017-07
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CollectionData from: Multiscale Simulations Examining Glycan Shield Effects on Drug Binding to Influenza Neuraminidase
- The input and output Brownian dynamics trajectories associated with this study.
- Date: 2017 to 2020
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CollectionData from: Readily Available Primary Aminoboranes as Powerful Reagents for Aldimine Synthesis
- Date: 2017 to 2018
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CollectionData from: Soft robotic steerable micro-catheter for the endovascular treatment of cerebral disorders
- Results of analysis and experiment on steerable microcatheters and microguidewires, including video and raw data.
- Date: 2017-01-01 to 2021-06-30
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CollectionData from: Structural basis for ligand modulation of the CCR2 conformational landscape
- This collection contains the molecular dynamics trajectories and analysis scripts used in the paper “Structural basis for ligand modulation of the CCR2 conformational landscape”.
- Date: 2017 to 2018
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CollectionCalifornia Imaging FlowCytobot Network (CA IFCB Network)
- The California Imaging Flowcytobot Network (CA IFCB Network) is a statewide network of automated in situ phytoplankton measurements to aid implementation of an automated early warning system for the detection of potential Harmful Algal Blooms (HABs).
- Date: 2016 to 2024
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CollectionKastrouli Mycenaean Excavations, Greece 2016
- Files relevant to the 2016 archaeological excavations of the site Kastrouli, Greece including artifact, photography, geospatial, and other data.
- Date: 2016-07-20 to 2016-08-03
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CollectionData from: Who's Asking? Interviewer Coethnicity Effects in African Survey Data
- This collection contains the code, data, and output files associated with the article indicated herein.
- Date: 2012
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CollectionData from: Contrasting Local and Long-Range-Transported Warm Ice-Nucleating Particles During an Atmospheric River in Coastal California, USA
- Data, modeling results and analyses supporting research into meteorology and ice nucleating particles.
- Date: 2016-03-05 to 2018-05-01
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CollectionData from: Improved Forecast Skill through the Assimilation of Dropsonde Observations from the Atmospheric River Reconnaissance Program
- This dataset are initial and boundary conditions generated by West-WRF implemented at Scripps Institution of Oceanography of UC San Diego for the Atmospheric River Reconnaissance dropsonde data denial experiments described in Zheng et al. 2021 (JGR). With this dataset, one should be able to repeat the WRF simulations for the NoDROP and WithDROP experiments using WRF V3.9.1.1.
- Date: 2016-02-14 to 2019-03-01
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CollectionData from: Carbon and Oxygen Isotopic Fractionation in the Products of Low-Temperature VUV Photodissociation of Carbon Monoxide
- Carbon and oxygen isotopic fractionation during photodissociation by VUV photons. This Matlab based model only calculates the isotope effect in the self-shielding process and not by any other means (e.g., predissociation). Data files are included.
- Date: 2016 to 2018
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CollectionData from: Eddy-induced acceleration of Lagrangian floats
- Simulated Argo float positions computed using velocities from the Estimating the Circulation and Climate of the Ocean, Phase II (ECCO2) project.
- Date: 2016 to 2019
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CollectionData from: Implications of Byproduct Chemistry in Nanoparticle Synthesis
- Absorption spectra of organic byproducts of tetrachloroaurate reduction by 2-(N-morpholino)ethanesulfonate (MES) were calculated via time-dependent density functional theory. These include small organic molecules, organic MES oligomers, and Au(I) complexes.
- Date: 2016 to 2018
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CollectionData from: Is the Mediterranean the New Rio Grande? U.S. and E.U. Immigration Pressures in the Long Run
- This project uses a gravity-style model to project bilateral migration flows for the next 40 years. It shows that Europe—unlike the US—will face substantial, demographically driven migration pressures from across the Mediterranean for decades to come.
- Date: 2016-01-01 to 2016-05-31
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CollectionData from: Superconductivity Found in Meteorites
- This data details the discovery and analysis of superconducting material in two meteorites. These are the first superconducting materials found in extraterrestrial samples and the superconducting phases are characterized as alloys of lead, tin and indium.
- Date: 2016 to 2019
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CollectionRadiosonde Data Collected During California Storms
- Vertical profiles of temperature, humidity, pressure, and wind speed collected during Atmospheric River events in California (2017-2021).
- Date: 2016 to 2021
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CollectionThe CONNected objECT, or CONNECT algorithm applied to National Aeronautics and Space Administration (NASA) Modern-Era Retrospective Analysis for Research and Applications, Version 2 (MERRA V2) - Integrated Water Vapor from 1980 to 2016
- The CONNected objECT (CONNECT) algorithm is applied to global Integrated Water Vapor Transport (IVT) data from the NASA’s Modern-Era Retrospective Analysis for Research and Applications – Version 2 reanalysis product for the period 1980 to 2016.
- Date: 2016
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CollectionOrganic and Elemental Composition of Submicron Aerosol Particles during AWARE at McMurdo Station, Antarctica
- Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups and X-ray Fluorescence (XRF) of elements in submicron particles at McMurdo Station, Antarctica.
- Date: 2015-11-29 to 2016-12-19
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CollectionAerosol Particle Chemical and Physical Measurements on the 2015, 2016, 2017, and 2018 North Atlantic Aerosols and Marine Ecosystems Study (NAAMES) Research Cruises
- Size distributions, organic functional groups, and non-refractory and single particle composition of North Atlantic marine aerosol particles
- Date: 2015-11-06 to 2015-11-30; 2016-05-11 to 2016-06-05; 2017-08-30 to 2017-09-24; 2018-03-20 to 2018-04-13
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CollectionData from: Measuring Seafloor Strain with an Optical Fiber Interferometer
- A 95.5 day long record of earth strain collected on the seafloor 95 km offshore Oregon was collected (ocean depth was 1910 m). The instrument used was a 200-m-long optical fiber cable, stretched between two anchors in an east-west line.
- Date: 2015-10-24 to 2016-01-27
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CollectionData from: Observations of Double Diffusive Staircase Edges in the Arctic Ocean
- CTD profiles collected in the Canada Basin with a Shallow Water Integrated Mapping System (SWIMS).
- Date: 2015-09-18 to 2015-09-20
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CollectionData from: Electrostatic interactions as mediators in the allosteric activation of PKA RIalpha
- Molecular dynamics input files, trajectories and analysis scripts used in the paper "Electrostatic interactions as mediators in the allosteric network of PKA RIalpha".
- Date: 2015-09-15
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CollectionData from: Drift-Corrected Seafloor Vertical Deformation at Axial Seamount 2013-2014
- Data from a Self-Calibrating Pressure Recorder (SCPR) deployed at Axial Seamount from 2013 to 2015. This is seafloor height change (cm), converted from pressure (kPa), corrected for ocean tides and pressure gauge drift.
- Date: 2015-08-25
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CollectionData from: Airborne observations of shoaling and breaking internal waves
- This collection contains data presented in: "Airborne observations of shoaling and breaking internal waves." This includes a mosaic of sea surface temperature, spectral analysis of temperature structures, surface velocities, and areas undergoing breaking.
- Date: 2015-08-01
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CollectionResearch based PAM50 Signature from the Women's Healthy Eating and Living (WHEL) Study
- PAM50 subtype calls, ROR risk groups and scores are provided.
- Date: 2015-07-29 to 2015-11-06
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CollectionAn annotated checklist of the bees (Hymenoptera: Anthophila) of San Diego County, California
- This database represents an ongoing survey to document all the bee species that occur within the bounds of San Diego County. As this project is still ongoing, the database will be updated periodically with additions and/or corrections.
- Date: July 2015 to August 2020
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CollectionLawrence Livermore National Laboratory (LLNL) Open Data Initiative
- Lawrence Livermore National Laboratory’s Data Science Institute shares some of LLNL’s challenging and unique data sets with the larger data science community through its Open Data Initiative.
- Date: July 2015 to present
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CollectionData from: Quantifying influence of human choice on the automated detection of Drosophila behavior by a supervised machine learning algorithm
- This data collection contains original movie files, files derived from a tracking program (FlyTracker) and a machine learning-based behavioral classification suite (JAABA), and behavior classifiers for Drosophila social behaviors. These constitute source data of our publication (Leng, X., et al., 2020, in press). With our custom codes (available at https://github.com/asahinak/Leng_Wohl_etal_2020_JAABA_vs_human_annotation), readers can reproduce all the results presented in the article.
- Date: 2015-03 to 2018-09
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CollectionData from: A Living Vector Field Reveals Constraints on Galactose Network Induction in Yeast
- To study how cellular traits produce population phenotypes, we built living vector fields from single-cell timecourses of the proteins Gal3p and Gal1p as yeast switched to galactose from other nutrients. This collection has data and analysis codes.
- Date: 2015 to 2016
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CollectionData from: Building Cultural Heritage Resilience through Remote Sensing: An Integrated Approach using Multi-temporal Site Monitoring, Datafication, and Web-GL Visualization
- This collection integrates highly accurate 3D snapshots of Bodie's historic buildings before/after disturbance, or post-restoration, and other 3D geospatial data that were used to monitor and digitally preserve important cultural resources at Bodie California State Historic Park.
- Date: 2015 and 2020
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CollectionData from: Episodic Southern Ocean heat loss and its mixed layer impacts revealed by the furthest south multi-year surface flux mooring
- This dataset contains Quality Controlled daily mean air-sea heat flux estimates from the NSF Ocean Observatories Initiative Southern Ocean mooring site for the period 2015 to 2017, as used in the analysis of Ogle et al. 2018 (doi:10.1029/2017GL076909)
- Date: 2015 to 2017
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CollectionData from: Internal tide structure and temporal variability on the reflective continental slope of southeastern Tasmania
- This collection contains in situ data (from 3 moorings and 1 CTD/LADCP station) from the Tasman Tidal Dissipation Experiment (T-TIDE) that was analyzed in Marques et al. (2020).
- Date: From 2015-01 to 2015-03
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CollectionData from: Observations and Modeling of Ocean Circulation in the Seychelles Plateau Region
- This collection contains raw and processed data from a variety of velocity, pressure, temperature and salinity sensors deployed from December 2016 to March 2019 over the Seychelles Plateau and a subset of an Ocean General Circulation POP model from the South Tropical Indian Ocean.
- Date: Data: 2015 to 2019; Model: 1993 to 2009
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CollectionData from: Observations of Tidally Driven Turbulence over Steep, Small-scale Topography Embedded in the Tasman Slope
- In-situ observations from the Tasman Tidal Dissipation Experiment (TTIDE) collected around a small-scale bump embedded in the continental slope of Tasmania.
- Date: 2015-01 to 2015-03
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CollectionData from: Southern California Coastal Response to the 2015-16 El Niño
- Airborne lidar datasets collected on 6-October-2015 and 22-March-2016, and processed into 1-m resolution digital elevation models.
- Date: 2015 to 2016
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CollectionData from: Subaerial Profiles at Two Beaches: Equilibrium and Machine Learning
- This collection contains observations of beach elevation and model derived wave statistics from two locations in San Diego County: Torrey Pines State Beach and Black’s Beach (La Jolla, CA).
- Date: 2015-01 to 2023-12
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CollectionEnergy density and content of forage species in the California Current Ecosystem
- Energy density and content of forage species in the California Current Ecosystem were determined from samples collected in Southern and Central California during 2015-2019.
- Date: 2015 to 2019
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CollectionNative bees in San Diego's coastal sage scrub reserves and fragments, surveyed in 2015 and 2016
- A dataset of bees and plants in coastal sage scrub reserves and habitat fragments in coastal San Diego County, collected by PhD student Keng-Lou James Hung in 2015 and 2016.
- Date: 2015 to 2016
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CollectionPlant-pollinator interaction networks in coastal sage scrub reserves and fragments in San Diego
- Data here describe the interactions between plants and putative pollinators in large natural reserves (area > 500 ha; n = 6) and small habitat fragments (area < 60 ha; n = 6) of coastal sage scrub habitat.
- Date: 2015 to 2016
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CollectionThe Cross-Surfzone/Inner-shelf Dye Exchange (CSIDE) Study
- Observational data and analysis from the NSF-funded Cross-Surfzone/Inner-shelf Dye Exchange (CSIDE) Study.
- Date: 2015
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CollectionTraining image data for: Environmental and ecological drivers of harmful algal blooms in the Southern California Bight
- The datasets include example images of marine protists and copepods. The images were collected by the Scripps Plankton Camera (http://spc.ucsd.edu/), located at the end of the Scripps Pier, La Jolla, CA, at the tide-dependent depth of approximately 3-4 m.
- Date: 2015 to 2019
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CollectionAerosol Composition and Size Measurements at Fresno and Fontana
- Non-refractory aerosol particle and refractory black carbon mass concentrations, size distributions, and coatings along with single particle compositions and organic aerosol functional groups in Fresno and Fontana.
- Date: 2014-12-19 to 2015-01-13 (Fresno); 2015-07-04 to 2015-07-28 (Fontana)
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CollectionStack Gas and Plume Aerosol Measurements from Renewable Diesel and Ultra Low Sulfur Diesel in At-Sea Operation of Research Vessel Robert Gordon Sproul
- Gas and particle emissions from the R/V Sproul were measured in September 2014 and 2015 using two sets of real-time instruments, with gas analyzers sampling directly from the stack and particle instruments intercepting the “fresh” plume, directly after emission into the atmosphere.
- Date: 2014-09-29 to 2015-12-05
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CollectionData from: Allostery through the Computational Microscope: cAMP Activation of a Canonical Signalling Domain
- This collection contains the molecular dynamics trajectories scripts and models used in the paper “Allostery through the computational microscope: cAMP activation of a canonical signalling domain”.
- Date: 2014-08-24
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CollectionAmbient and Sea Sweep Generated Aerosol Measurements in the North Atlantic in May-June 2014 during WACS2 (Western Atlantic Climate Study 2)
- Measurements of ambient and seawater generated marine aerosol particle chemical and physical properties in the North Atlantic in May-June 2014.
- Date: 2014-05-20 to 2014-06-05
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CollectionSouthern Ocean Carbon and Climate Observations and Modeling (SOCCOM) and Global Ocean Biogeochemistry (GO-BGC) Biogeochemical-Argo Float Data Archive
- Data from biogeochemical Argo profiling floats within the SOCCOM and GO-BGC programs. Additional floats outside of these programs may also be included, provided their data-streams are managed by the Monterey Bay Aquarium Research Institute (MBARI).
- Date: 2014-03-27 to present
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CollectionSouthern Ocean Carbon and Climate Observations and Modeling (SOCCOM) Float Data Archive
- Biogeochemical profiling floats in the Southern Ocean deployed by the SOCCOM program.
- Date: 2014-03-27 to 2022-05-19
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CollectionArgo BathYmetry SenSing (ABYSS)
- This collection contains locations, depths and times of ocean bathymetry detection using Deep Argo floats, along with estimated horizontal displacements.
- Date: 2014 to present
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CollectionCalifornia Local Tax Ballot Measures
- Public records associated with most of the local tax measures put before California voters since 1986, including excerpts from official voter information guides and sample ballots, and proposed ordinance text, where available.
- Date: 2014 to 2020
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CollectionData from: Calibrated absolute seafloor pressure measurements for geodesy in Cascadia
- Raw and corrected pressure data from campaign-style surveys of absolute calibrated sea pressure using an Absolute Self-Calibrating Pressure Recorder (ASCPR) in the Cascadia subduction zone from 2014 to 2017.
- Date: 2014 to 2017
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CollectionData from: Climate change intensification of horizontal water vapor transport in CMIP5
- The dataset contains simulations of water vapor transport from 22 CMIP5 models including the historical, RCP4.5, and RCP8.5 runs.
- Date: 2014 to 2015
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CollectionData from: Effect of atmospheric forcing resolution on simulated mixed layer depth in the North Pacific
- This dataset contains daily output from two eddying ocean simulations in the North Pacific. The two experiments have the same configuration except for the atmospheric forcing resolution.
- Date: 2014 to 2018
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CollectiondataMares: Ecosystem Dynamics
- The datasets in this collection are used for analyses on relationships between different ecosystems, as well as humans and the habitats surrounding us, to elucidate the impact that anthropogenic activities have on the environment.
- Date: 2014 to 2023
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CollectionGenotype data from: NIDA Center for GWAS in Outbred rats
- This collection contains genotype data collected as part of the NIDA Center for GWAS in Outbred rats and more than 10 additional research projects that use N/NIH heterogeneous stock (HS) outbred rats.
- Date: 2014 to present
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CollectionLong-term Coral Reef Monitoring Across Leeward Maui
- This collection of annual large-area image surveys across Leeward Maui coral reefs can be used to better understand the effects of local and global stressors on benthic community dynamics by documenting the growth, structural complexity, spatial structure, and competitive dynamics of benthic taxa.
- Date: 2014 to present
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CollectionThe Center for GWAS in Outbred Rats Database (C-GORD)
- C-GORD (The Center for GWAS in Outbred Rats Database) provides access to the data generated by the NIDA center for genetic studies of drug abuse and other behaviors as well as physiological phenotypes in N/NIH heterogeneous stock (HS) rats; the data is collected by more than 15 research projects.
- Date: 2014 to present
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CollectionAutonomous Underwater Vehicle (AUV)-borne velocity measurements collected over a fringing coral reef near Makua Beach, Oahu, Hawai'i
- Date: 2013-09-06 to 2013-09-08
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CollectionOceanographic data taken over a fringing coral reef near Makua Beach, Oahu, Hawai'i (2013)
- Raw and averaged velocity, temperature, salinity, and pressure data from a coral reef in southwestern Oahu, Hawai'i.
- Date: 2013-09-06 to 2013-09-30
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CollectionCarbonaceous Aerosol Particle Measurements from Southeast Atmosphere Study (SOAS) 2013 in Look Rock, Tennessee, USA
- HR-Tof-AMS submicon mass spectra for ensemable mass and single paritcles (by LS), Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups of submicron particles,and size distributions at Look Rock during SOAS 2013.
- Date: 2013-06-01 to 2013-07-18
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CollectionThe Bangarang Project
- Data associated with the "Bangarang Project", Eric Keen's dissertation study on the foraging ecology of whales in the Kitimat Fjord System, British Columbia.
- Date: 2013-05 to 2015-09
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CollectionData from: Instrumented Wave Gliders for Air-Sea Interaction and Upper Ocean Research
- This collection regroups data sets collected during four major field programs from 2013 to 2020 from a fleet of Wave Gliders specifically designed and instrumented for air-sea interaction and upper ocean observations by the Air-Sea Interaction Laboratory at Scripps Institution of Oceanography.
- Date: 2013 to 2020
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CollectionData from: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning
- The kinetic rate constants of four biochemically relevant ligand-receptor systems were estimated and described in a publication. This collection includes input files, output files, trajectories, and statistics associated with the study.
- Date: 2013 to 2015
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CollectionData from: Spectral Refraction Modeling of Waves around the Steep Reef at Palau
- This collection contains observations of bulk wave statistics from 10 sites around the island chain of Palau and wave estimates from a spectral refraction model.
- Date: 2013 to 2023
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CollectionObservations of Solar Analog Field Stars from the Hamilton Echelle Spectrograph at Lick Observatory
- This observing program used the Hamilton Echelle Spectrograph on the three meter Shane telescope at Lick Observatory to obtain high resolution spectroscopic observations of 211 solar analog field stars.
- Date: 2013 to 2014
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CollectionData from: Latent profile analysis of objectively measured sleep, physical activity, and sedentary time and associations with health in adult women
- This dataset represents the analysis variables for a group of 372 women collected at 4 different sites across the United States, including sleep quality, physical activity and sedentary behaviors.
- Date: 2012-10-10 to 2014-01-13
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CollectionData from: The relations between sleep, time of physical activity, and time outdoors among adult women
- Exploring the relation between physical activity, time spent outdoors and sleep quality and duration.
- Date: 2012-10-10 to 2014-01-13
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CollectionMeasurements of Generated and Ambient Marine Aerosol Particles in August 2012 on board the R/V Ronald H. Brown during the Western Atlantic Climate Study (WACS)
- Measurements of generated marine aerosol particle physical and chemical properties.
- Date: 2012-08-19 to 2012-08-27
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CollectionAerosol and Cloud Observations in La Jolla, CA, in May-June 2011 during SOLEDAD (Stratocumulus Observations of Los-Angeles Emissions Derived Aerosol-Droplets)
- Measurements of polluted marine aerosol and cloud droplet chemical and physical properties at Mt. Soledad and Scripps Pier in La Jolla, California.
- Date: 2012-05-01 to 2012-06-18
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Collection100 Island Challenge Collection
- The 100 Island Challenge is a collaborative effort to describe the variation of coral reefs from across the globe. We combine classical field surveys with innovative imaging and data technologies to archive reefs digitally and watch how populations change through time.
- Date: 2012 to present
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CollectionCenter for Environmental Imaging Collection
- The Center for Environmental Imaging (CEI) is an effort to digitally archive imagery of the natural world. This collection includes image datasets from a diversity of projects and environmental habitats.
- Date: 2012 to present
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CollectionData from: Carbonic Anhydrases, EPF2 and a Novel Protease Mediate CO2 Control of Stomatal Development
- RNA-Seq experiments analyzing the Arabidopsis response to low and elevated carbon dioxide growing conditions were conducted to capture early signaling events as seedlings were adapting to stress.
- Date: 2012 to 2013
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CollectionData from: Characterizing Non-phase-locked Tidal Currents in the California Current System using High-frequency Radar
- Processed time series from HFR, power spectra from HFR, and fitted harmonic constituents from analyzed HFR. Data from a bottom pressure sensor used in suppl. Scripts used in the study to analyze and process data and to make visualizations.
- Date: 2012-01-01 to 2021-04-01
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CollectionData from: Commitment Problems or Bidding Wars? Rebel Fragmentation as Peace Building
- This project uses an original dataset of field commanders in post-civil war Tajikistan to show that warlords from the victorious faction were as likely to be purged from the ruling coalition in a given year as warlords from the defeated faction.
- Date: 2012
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CollectionData from: Spatial Analysis and Heritage Conservation: Leveraging 3-D Data and GIS for Monitoring Çatalhöyük Earthen Architecture
- This collection includes the remote sensing dataset recorded at Çatalhöyük, Turkey, between 2012-2017. The deterioration of earthen architecture through time was assessed by comparing these 3-D data and with geo spatial methods.
- Date: 2012 to 2017
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CollectionEliminating In-Home Smoking project–urinary biomarker evidence of tobacco and cannabis smoke exposure of children
- Real-time feedback alerts for elevated in-home air particle concentrations to reduce child secondhand smoke exposure, as measured by biomarkers of nicotine and THC.
- Date: 2012 to 2015; 2019 to 2022
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CollectionMarine background and plume aerosol measurements off the coast of California in July-August 2011 during E-PEACE (Eastern Pacific Emitted Aerosol Cloud Experiment)
- Measurements of background, generated smoke and cargo ship plume aerosol particles and their chemical and physical properties. Measurements include shipboard measurements near the ocean surface.
- Date: 2011-07-12 to 2011-08-18
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CollectionData from: Urbanization-induced habitat fragmentation erodes multiple components of temporal diversity in a Southern California native bee assemblage
- A dataset of bees and plants in coastal sage scrub reserves and habitat fragments in coastal San Diego County, collected by PhD student Keng-Lou James Hung in 2011 and 2012.
- Date: 2011-04-12 to 2012-08-13
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CollectionCalifornia Smokers Cohort (CSC)
- The objective of this survey was to collect statewide data on tobacco-related behaviors, knowledge of and attitudes towards smoking, and monitoring the effect of State-initiated programs on individual target populations.
- Date: 2011 to 2012
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CollectionData from: Immersive Visualization and Curation of Archaeological Heritage Data: Çatalhöyük and the Dig@IT App
- The purpose of this collection is to curate online all the 3D models and related metadata representing the three-dimensional stratigraphy of Çatalhöyük Building 89 as they are disseminated through the open source virtual reality application Dig@IT.
- Date: 2011 to 2015
Library Digital Collections