Browse by Collection: UCSD Research Data Collections

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1. 
   Collection

   BindingDB: Measured Binding Data for Protein-Ligand and Other Molecular Systems

   • This collection contains the full BindingDB dataset of experimental protein-ligand and host-guest binding data.
   • Date: 2000 to present
2. 
   Collection

   Data from: A Climatic Sand Management Model for Cardiff State Beach, CA

   • Annual mean beach width and nearshore sand volume survey estimates for 2000-2019 at South Torrey Pines and Cardiff State Beach, CA, and associated sediment budget modeling code for Cardiff State Beach.
   • Date: 2000 to 2021
3. 
   Collection

   dataMares Collection

   • DataMares holds a massive amount of fishery, reef, mangrove, and other data pertaining to the ecology of Mexico, particularly coastal and marine ecosystems of the Gulf of California, and delivers this information in an interactive and digestible manner.
   • Date: 1998 to present
4. 
   Collection

   dataMares: Ecological Monitoring

   • This collection contains databases from regular surveys conducted to track annual changes in the structure, function, and health of marine ecosystems, as well as organisms like fishes and invertebrates at numerous island and coastal sites.
   • Date: 1998 to present
5. 
   Collection

   SWellEx-96 Experiment Acoustic Data

   • SWellEx96 was an ocean acoustic experiment, conducted off San Diego, May 1996. It collected broadband/multitone signals between 50 and 400 Hz on horizontal, vertical, and tilted line arrays.
   • Date: 1996-05-10 to 1996-05-18
6. 
   Collection

   Data from: North American Monsoon Impacts Southern California’s Coastal Low Clouds

   • This collection contains data from "North American Monsoon Impacts Southern California’s Coastal Low Clouds" (Clemesha et al. 2023). Data files include: satellite-derived Coastal Low Cloudiness (CLC) for May - September 1996 - 2020, seasonal cycle fit of CLC used to create daily anomalies, San Diego airport cloud cover, precipitable water content from 850 to 300 hPa from observations in southern and northern California, a previously published single column model radiative scheme with input and outputs files used in this study.
   • Date: May through September, 1996 to 2020
7. 
   Collection

   Data from: The Influence of Cloudiness on Hydrologic Fluctuations in the Mountains of the Western United States

   • Daily cloud cover indices derived from 4x4 km GOES visible albedo product for snow pillow sites and stream gauges in the mountains of the western U.S.
   • Date: 1996-01-01 to 2015-12-31
8. 
   Collection

   Women's Healthy Eating and Living (WHEL) Study

   • The WHEL Study was a multisite, randomized, controlled trial of the effectiveness of a high-vegetable, low-fat diet in reducing additional breast cancer events and early death in women with early-stage invasive breast cancer.
   • Date: 1995 to 2006
9. 
   Collection

   Data from: Interannual variations in meltwater input to the Southern Ocean from Antarctic ice shelves

   • Height changes and basal melt rates of Antarctic ice shelves from satellite remote sensing, 1994–2018.
   • Date: 1994 to 2018
10. 
    Collection

    Data from: The Seasonal Cycle of Significant Wave Height in the Ocean: Local Versus Remote Forcing

    • This collection consists of NetCDF files that contain intermediate products derived from observer and modelled data produced by the French Research Institute for Exploitation of the Sea (IFREMER) and Remote Sensing Systems, corresponding to analysis by Colosi et al. (2021).
    • Date: 1993-01-01 to 2016-12-31
11. 
    Collection

    Data from: Ocean Surface Salinity Response to Atmospheric River Precipitation in the California Current System

    • Oceanic and atmospheric measurements, reanalysis and modeled outputs in the California Current System.
    • Date: 1992 to 2019
12. 
    Collection

    California Tobacco Survey (CTS)

    • The objective of these surveys is to collect representative statewide data on cigarette smoking behavior, attitudes towards smoking, media exposure to smoking, and use of tobacco products other than cigarettes, from populations living in California.
    • Date: 1990 to 2011
13. 
    Collection

    Data from: Plankton energy flows using a global size-structured and trait-based model

    • This collection includes a global 20 year (1990-2009) climatology of diagnostic and prognostic variables for the Size-based Plankton Ecological TRAits (MARBL-SPECTRA) model.
    • Date: 1990 to 2009
14. 
    Collection

    Underway Shipboard Acoustic Doppler Current Profiler (SADCP) Data Archive

    • Underway shipboard acoustic Doppler current profiler (SADCP) database assembled from the public archive of CODAS post-processed data.
    • Date: 1990 to 2020
15. 
    Collection

    Scripps O2 Program Data

    • The Scripps O2 Program website at https://scrippso2.ucsd.edu provides access to openly available atmospheric O2/N2 ratio and CO2 concentration data from various sources along with graphics. Redundant copies of the atmospheric O2/N2 and CO2 data from 12 sampling stations are being deposited here, through the UC San Diego Library, to provide enhanced discovery, long-term accessibility, and preservation. The latest data archives from the 10 active stations are added to this collection as they become available.
    • Date: 1989 to present
16. 
    Collection

    Data from: Machine learning for daily forecasts of Arctic sea-ice motion: an attribution assessment of model predictive skill

    • MATLAB R2021b, Python and bash files used for data download and analysis. Processed data and MATLAB R2021b plotting files.
    • Date: 1989 to 2021
17. 
    Collection

    Data from: The Agricultural Productivity Gap

    • Dataset contains data by country for about 150 countries on GDP per capita, employment share in agriculture, value added share in agriculture, agricultural productivity gap, average hours worked, years of schooling, and human capital.
    • Date: 1988 to 2011
18. 
    Collection

    Cell Centered Database

    • A collection of high resolution 2D, 3D and 4D data from light and electron microscopy of tissues from the nervous system and other systems.
    • Date: 1986 to 2012
19. 
    Collection

    CCHDO Hydrographic Data Archive

    • The CCHDO Hydrographic Data Collection contains high quality, global, vessel-based CTD and Niskin bottle data from GO-SHIP, WOCE, CLIVAR and other repeat hydrography programs past and present.
    • Date: 1972 to present
20. 
    Collection

    Heavy Metals in the Ocean Insect, Halobates

    • Data on 7 heavy metals are available from samples of Halobates collected from the Pacific Ocean: Cr (chromium), Cu (copper), Pb (lead), Mn (manganese), Ni (nickel), Ti (titanium) and Zn (zinc).
    • Date: 1961 to 1978