Library Digital Collections

Browse by Collection: UCSD Research Data Collections

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  1. Scripps-KAUST Regional Integrated Prediction System (SKRIPS)

    • A regional coupled ocean–atmosphere model (based on MITgm, WRF, and ESMF) to study air--sea feedbacks.
    • Creation Date: 2019
  2. Integrated Vapor Transport Forecast Models, Reanalysis, and Postprocessing Machine Learning Models for the North American West Coast [2008-2017]

    • Integrated Vapor Transport (IVT) for the GFS forecast model and the MERRA2 reanalysis for the North American West Coast and Eastern Pacific. Additionally, this dataset contains the convolutional neural networks used to post-process this forecast.
    • Creation Date: 01-11-2018 - 04-13-2018,
  3. California Cooperative Oceanic Fisheries Investigations (CalCOFI): Acoustic Fisheries Data (2017- )

    • Non-calibrated multi-frequency acoustic fisheries data (.raw files) collected aboard RV Sally Ride on the November 2017 CalCOFI (California Cooperative Fisheries Investigations) cruise
    • Creation Date: 2017-11-09 to 2017-11-24
  4. Data from: Exploration and Explanation in Computational Notebooks

    • Analysis of approximately 1.25 million Jupyter Notebooks downloaded from public repositories on GitHub in July 2017.
    • Creation Date: July 2017
  5. Data from: A Glimpse through Time and Space: Visualizing Social Memory and History-making at Çatalhöyük

    • This collection includes 3-D models, derived 3-D renders, Unity 3D asset packages, a Win64 3-D app, and related metadata that reconstruct both spatially and temporally (4-D) the ‘Shrine’ 10 sequence at the Neolithic site of Çatalhöyük, Turkey
    • Creation Date: 2017
  6. Data From: Continuous Evaluation of Ligand Protein Predictions: A Weekly Community Challenge for Drug Docking

    • All structures and RMSDs used in Continuous Evaluation of Ligand Protein Predictions: A Weekly Community Challenge for Drug Docking are provided here.
    • Creation Date: 2017-2018
  7. Data from: Increasing STEM Undergraduate Participation in Innovative Activities: Field Experimental Evidence

    • Measures of performance on an innovation contest by whether or not participants receive randomized encouragement, and whether participants self-selected into the contest or joined after receiving a monetary inducement for doing so.
    • Creation Date: 2017-01 to 2017-07
  8. Data from: Structural basis for ligand modulation of the CCR2 conformational landscape

    • This collection contains the molecular dynamics trajectories and analysis scripts used in the paper “Structural basis for ligand modulation of the CCR2 conformational landscape”.
    • Creation Date: 2017-2018
  9. Kastrouli Mycenaean Excavations, Greece 2016

    • Files relevant to the 2016 archaeological excavations of the site Kastrouli, Greece including artifact, photography, geospatial, and other data.
    • Creation Date: July 20 – August 3, 2016
  10. Data from: Who's Asking? Interviewer Coethnicity Effects in African Survey Data

    • This collection contains the code, data, and output files associated with the article indicated herein.
    • Creation Date: 2012,
  11. Data from: Carbon and Oxygen Isotopic Fractionation in the Products of Low-Temperature VUV Photodissociation of Carbon Monoxide

    • Carbon and oxygen isotopic fractionation during photodissociation by VUV photons. This Matlab based model only calculates the isotope effect in the self-shielding process and not by any other means (e.g., predissociation). Data files are included.
    • Creation Date: 2016-2018
  12. Data from: Implications of Byproduct Chemistry in Nanoparticle Synthesis

    • Absorption spectra of organic byproducts of tetrachloroaurate reduction by 2-(N-morpholino)ethanesulfonate (MES) were calculated via time-dependent density functional theory. These include small organic molecules, organic MES oligomers, and Au(I) complexes.
    • Creation Date: 2016-2018,
  13. Data from: Is the Mediterranean the New Rio Grande? U.S. and E.U. Immigration Pressures in the Long Run

    • This project uses a gravity-style model to project bilateral migration flows for the next 40 years. It shows that Europe—unlike the US—will face substantial, demographically driven migration pressures from across the Mediterranean for decades to come.
    • Creation Date: 2016-01-01 to 2016-05-31
  14. The CONNected objeECT, or CONNECT algorithm applied to National Aeronautics and Space Administration (NASA) Modern-Era Retrospective Analysis for Research and Applications, Version 2 (MERRA V2) - Integrated Water Vapor from 1980 to 2016

    • The CONNected objECT (CONNECT) algorithm is applied to global Integrated Water Vapor Transport (IVT) data from the NASA’s Modern-Era Retrospective Analysis for Research and Applications – Version 2 reanalysis product for the period 1980 to 2016.
    • Creation Date: 2016
  15. Organic and Elemental Composition of Submicron Aerosol Particles during AWARE at McMurdo Station, Antarctica

    • Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups and X-ray Fluorescence (XRF) of elements in submicron particles at McMurdo Station, Antarctica.
    • Creation Date: 29 Nov 2015 to 19 Dec 2016
  16. Aerosol Particle Chemical and Physical Measurements on the 2015, 2016, 2017, and 2018 North Atlantic Aerosols and Marine Ecosystems Study (NAAMES) Research Cruises

    • Size distributions, organic functional groups, and non-refractory and single particle composition of North Atlantic marine aerosol particles
    • Creation Date: 2015-11-06 to 2015-11-30; 2016-05-11 to 2016-06-05; 2017-08-30 to 2017-09-24
  17. Data from: Measuring Seafloor Strain with an Optical Fiber Interferometer

    • A 95.5 day long record of earth strain collected on the seafloor 95 km offshore Oregon was collected (ocean depth was 1910 m). The instrument used was a 200-m-long optical fiber cable, stretched between two anchors in an east-west line.
    • Creation Date: 2015-10-24 to 2016-01-27
  18. Data from: Electrostatic interactions as mediators in the allosteric activation of PKA RIalpha

    • Molecular dynamics input files, trajectories and analysis scripts used in the paper "Electrostatic interactions as mediators in the allosteric network of PKA RIalpha".
    • Creation Date: 2015-09-15,
  19. Data from: Drift-Corrected Seafloor Vertical Deformation at Axial Seamount 2013-2014

    • Data from a Self-Calibrating Pressure Recorder (SCPR) deployed at Axial Seamount from 2013 to 2015. This is seafloor height change (cm), converted from pressure (kPa), corrected for ocean tides and pressure gauge drift.
    • Creation Date: 2015-08-25,