Browse by Collection: UCSD Research Data Collections
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Collection
Data from: A new method for diagnosing effective radiative forcing from aerosol-cloud interactions in climate models
- This dataset includes a new method for estimating shortwave ERFaci from liquid clouds using cloud radiative kernels and MODIS joint histograms, offering insights into the Twomey effect, liquid water path, and cloud fraction adjustments.
- Date: 2024
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Collection
Data from: Quantifying Bioluminescent Light Intensity in Breaking Waves using Numerical Simulations
- This collection features velocity, volume fraction, and velocity gradient data interpolated onto a uniform Cartesian grid, along with Basilisk code for simulating breaking waves and Julia code for simulating bioluminescence.
- Date: 2024
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Collection
Educational Dataset Service Collection: Machine-learning suitable datasets curated for use in instruction
- Curated datasets appropriate for use in machine learning in instruction and research, including real research datasets, sanitized and synthetic administrative data from campus sources, and datasets commonly used for training in specific disciplines.
- Date: 2024 to present
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Collection
Hornsund Fjord 2023: Broadband Active Acoustic and Oceanographic Data
- This is a data set containing broadband active acoustic and oceanographic data collected in Hornsund Fjord, Svalbard.
- Date: 2023-07-07 to 2023-07-12
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Collection
Data from: A climate vulnerability assessment of cultural heritage in the La Fortaleza and San Juan National Historic Site World Heritage Site
- Inundation threats related to climate change in San Juan Bay, Puerto Rico, which includes the World Heritage Site of La Fortaleza and San Juan National Historic Site. The map contains separate layers for sea level rise from NOAA's Sea Level Rise Viewer Tool, and layers for other relevant variables produced by the Coastal Resilience Evaluation and Siting Tool (CREST), acquired in Spring 2023.
- Date: 2023-04-03 to 2023-06-09
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Data from: Genuine Carbene Versus Carbene-Like Reactivity
- Optimized geometries, frequencies, and single point calculations for reactants, products, reaction intermediates, and transition states involved in forming cyclic(aryl)(amino)carbene-metal complexes and decomposition products.
- Date: 2023-04 to 2023-11
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Aerosol Microphysics and Chemical Measurements at Mt. Soledad and Scripps Pier during the Eastern Pacific Cloud Aerosol Precipitation Experiment (EPCAPE) from February 2023 to February 2024
- Aerosol Microphysics and Chemical Measurements at Mt. Soledad and Scripps Pier during the Eastern Pacific Cloud Aerosol Precipitation Experiment (EPCAPE) from February 2023 to February 2024.
- Date: 2023-02-15 to 2024-02-14
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Art of Science
- UC San Diego Library Art of Science contest submissions.
- Date: 2021-02 to present
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Collection
California Proposition 56 Evaluation
- This collection includes biennial and technical reports assessing changes in tobacco-related indicators for California’s populations pre-and post-Proposition 56.
- Date: 2022-07-01 to present
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Collection
Data from: Prediction of Threonine-Tyrosine Kinase Receptor-Ligand Unbinding Kinetics with Multiscale Milestoning and Metadynamics
- Heat shock protein 90 (HSP90) and threonine tyrosine kinase (TTK) simulation enabled estimation of kinetic rates (SEEKR) calculations using both steered molecular dynamics and metadynamics.
- Date: 2022-05 to 2024-06
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Collection
Data from: Short-term variability of atmospheric helium revealed through a cryo-enrichment method
- He/N2 observations from Scripps Pier and supplementary O2/N2, Ar/N2 and CO2 data.
- Date: 2022-04-23 to 2022-05-25
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Supplemental large-area imaging data from: Groundtruthing assessments of lab-based coral thermal tolerance with large-area imaging
- This collection includes the supplemental large-area imaging (LAI) data from a study conducted on three reefs in southern Taiwan with different thermal histories. The study compared in-situ LAI monitoring with ex-situ experiments with the goal of groundtruthing the experimental results.
- Date: 2022-04-20 to 2022-09-23
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Collection
Data from: Diminished efficacy of regional marine cloud brightening in a warmer world
- Marine cloud brightening simulation output generated using the Community Earth System Model (CESM) version 2.2 described in Wan et al. (accepted).
- Date: 2022-04 to 2023-12
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Collection
Data from: Unexpected failure of regional marine cloud brightening in a warmer world
- Marine cloud brightening simulation output generated using the Community Earth System Model (CESM) version 2.2 described in Wan et al., (submitted).
- Date: 2022-04 to 2023-04
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Aerosol Measurements at Utqiagvik, Alaska, from 2022 to 2027 for Sustaining The Utqiagvik Aerosol Record of Decades (STUARD)
- This collection contains submicron aerosol particle number size distributions, CCN spectra, submicron aerosol inorganic ions and organic components, and oxygen isotopes measured at Utqiagvik from June 2022-2027.
- Date: 2022 to 2026
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Collection
Data and Code from: 3D Reconstruction and Segmentation of Barely Visible Impact Damage in Composites from Pulse-Echo Ultrasonic C-Scans
- 26 processed pulse-echo ultrasonic C-scans of composites with barely visible impact damage with varying layups and impact energies, with calculated time-of-flight, contours of damaged regions, damage depth map, and 3D reconstruction of the damage state.
- Date: 2022 to 2023
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Collection
Data and Code from: Retaining Short-Term Variability Reduces Mean State Biases in Wind Stress Overriding Simulations
- Fortran source code developed to override wind stress with a climatology in the Community Earth System Model (CESM) v. 1.2 and resulting GCM output data from Luongo et al. (2024).
- Date: 2022 to 2023
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Data from: NetSci: A Library for High Performance Biomolecular Simulation Network Analysis Computation
- This collection contains trajectory and molecular dynamics simulation output data for NetSci: A Library for High Performance Biomolecular Simulation Network Analysis Computation.
- Date: 2022-01-01 to 2024-04-01
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Data from: Toward probabilistic post-fire debris-flow hazard decision support
- For a Southern CA domain, from a 24-hour lead time forecast using the WRF model, on a 1-km grid for 100 ensemble members: 5-minute precipitation output for 12 UTC 8 Jan. 2018 to 12 UTC 10 Jan. 2018 and 12 UTC 1 Feb. 2019 to 12 UTC 3 Feb. 2019.
- Date: 2022-01-01 to 2022-02-28
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Measurements and Analysis Products from Baselining the Indirect Effect by Improving Quantification of Sea Spray and Marine Sources at Ascension Island during LASIC
- This collection provides data and codes used to retrieve aerosol mode fitting parameters, Hoppel minimum diameters from measured particle size distributions, cloud supersaturations, and cloud microphysical properties during the ARM LASIC campaign.
- Date: 2020 to 2024
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Data from: Identification of weakly- to strongly-turbulent three-wave processes in a micro-scale system
- Height of water surface at center of 40uL sessile drop at 115,200fps for ~1s during actuation by ~7MHz thickness mode ultrasound. Each data set was taken at the indicated ultrasound input power level (from 0-350 mW).
- Date: 2021-11-28 to 2022-01-18
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Collection
Data from: Airborne observations of surface winds, waves and currents from meso to submesoscales
- Coincident and collocated high-resolution observations of surface currents and directional properties of surface waves collected from an airborne instrument, the Modular Aerial Sensing System (MASS), collected off the coast of Southern California.
- Date: 2021-05-18 through 2021-11-05
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Collection
Data and Code from: Buoyancy Forcing Dominates the Cross-Equatorial Ocean Heat Transport Response to Northern Hemisphere Extratropical Cooling
- Fortran source code to developed to override wind stress in the Community Earth System Model (CESM) v. 1.2 and resulting GCM output data from Luongo et al. (2022).
- Date: 2021-05 to 2021-10
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Collection
Data from: Cobble Tracking Observations at Torrey Pines State Beach, CA, USA
- Wave data and cobble locations at Torrey Pines State Beach, San Diego, California.
- Date: 2021 to 2023
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Collection
Data from: QMrebind: Incorporating quantum mechanical force field reparameterization at the ligand binding site for improved drug-target kinetics through milestoning simulations
- The data set contains the files necessary to recalculate/reproduce the unbinding rates of ligands for the model host-guest systems and Hsp90-inhibitor complexes in the paper "QMrebind: Incorporating quantum mechanical force field reparameterization at the ligand binding site for improved drug-target kinetics through milestoning simulations."
- Date: 2021 to 2023
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Data from: Toward Enhanced Reusability: A Comparative Analysis of Metadata for Machine Learning Objects and Their Characteristics in Generalist and Specialist Repositories
- This dataset contains data reported in the paper, Labou et al. 2023, which aims to understand how researchers are currently documenting machine learning (ML) research outputs for sharing, and the extent to which repository metadata fields enable reuse of ML objects.
- Date: 2021 to 2023
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Genotype data from Crl:CFW(SW)-US_P08 stock of outbred mice
- Genotype data for CFW mice for the GWAS for age-related hearing loss.
- Date: 2021 to present
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Collection
The Catalyst at UC San Diego
- The Catalyst, founded summer of 2021, is an inclusive, open access paper series under the Undergraduate Research Hub at UCSD which aims to empower the voices of students who have a passion for conducting research.
- Date: 2021 to present
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Data from: Observations and Numerical Simulations of the Onset and Growth of Langmuir Circulations
- This collection contains data from observations and numerical simulations of Langmuir circulations, along with the relevant routines to generate figures in Andriatis et al. 2024.
- Date: 2020-11-04 to 2020-11-25
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Collection
Data from: Observations of Surface Gravity Wave Spectra from Moving Platforms
- This collection consists of ocean and atmospheric observations (e.g., waves and winds) collected off the coast of San Diego and San Francisco California from instrumented Boeing Liquid Robotics SV3 Wave Gliders.
- Date: 2020-09-01 to 2021-11-04
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Data from: Overcrowded Housing Reduces COVID-19 Mitigation Measures and Lowers Emotional Health Among San Diego Refugees from September to November of 2020
- Data for the present cross-sectional study were collected between September 2020 and November 2020 as part of PANA’s biannual community survey to address the primary research question: What is the association between housing and COVID-19 vulnerability?
- Date: 2020-09 to 2020-11
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Data from: SEEKR2: Versatile Multiscale Milestoning Utilizing the OpenMM Molecular Dynamics Engine
- This data set contains the files necessary to recreate the results in the paper "SEEKR2: Versatile Multiscale Milestoning Utilizing the OpenMM Molecular Dynamics Engine".
- Date: 2020-08 to 2022-03
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Data from: Wave-tide interaction for a strongly modulated wave field
- This collection contains the data sets and code required to generate each figure presented in the publication Ho, A., Merrifield, S. M., and Pizzo, N. (2022). Wave-tide interaction for a strongly modulated wave field. Journal of Physical Oceanography.
- Date: 2020-08-01 to 2021-08-01
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Atmospheric and oceanographic measurements from a Wave Glider autonomous surface vehicle collected off the coast of Southern California from May 2020 to December 2021
- This collection contains meteorology, wave, and current data from Wave Glider Autonomous Surface Vehicles (ASVs) gathered in a series of field deployments conducted off the coast of Southern California from May 2020 to December 2021. Our approach involved operations in close proximity to fixed National Data Buoy Center (NDBC), Coastal Data Information Program (CDIP), and Scripps Institution of Oceanography (SIO) moored buoy assets, which provided ground-truth data to characterize the quality of the Wave Glider measurements.
- Date: 2020-05 to 2021-12
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Data from: Feasibility of continuous fever monitoring using wearable devices
- Sixty-five continuous days of data at one-minute resolution covering fifty individuals reporting COVID-19 infections starting on day 45 in the data set.
- Date: 2020-03 to 2020-06
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Collection
Data and Code from: Measuring Turbulent Dissipation with Acoustic Doppler Velocimeters in the Presence of Large, Intermittent, Infragravity Frequency Bores
- Velocity data from Los Peñasquitos Lagoon and processing code to help researchers reproduce ADV de-spiking and turbulent spectrum calculation methods that work in the presence of non-linear, intermittent dynamics as well as a generally applicable, robust inertial sub-range fitting method.
- Date: 2020-02-02 to 2020-02-14
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Data from: The influence of C(sp3)H-Selenium Interactions on the 77Se NMR Quantification of the π-Accepting Properties of Carbenes
- The frequency and population analysis results for several 5- and 6-membered carbenes. Structures are unsimplified from those used experimentally.
- Date: 2020-02 to 2020-07
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Data from: Impact of Atmospheric River Reconnaissance Dropsonde Data on the Assimilation of Satellite Data in GFS
- This collection are the satellite radiance data from the data denial experiments for the 2020 atmospheric river reconnaissance. The data are generated by the NCEP GDAS system during January 24 – March 18, 2020, corresponding to analyses in Zheng et al. 2022.
- Date: 2020-01-24 to 2020-03-18
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Digital Media Lab
- This collection includes a range of 3D media projects created by the UC San Diego Library Digital Media Lab.
- Date: 2020-01-02
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Collection
Data from: Cyclic(Alkyl)(Amino)Carbene Ligands Enable Cu-Catalyzed Markovnikov Protoboration and Protosilylation of Terminal Alkynes: A Versatile Portal to Functionalized Alkenes
- Included are the Gaussian output files (.chk, .fchk, and .log) from DFT calculations on the free carbenes explored in the protoboration and protosilylation of alkynes.
- Date: 2020 to 2021
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Collection
Data from: Multi-Source Feature Fusion for Object Detection Association in Connected Vehicle Environments
- This dataset contains labeled virtual and real-world examples of object detection association in a connected vehicle environment.
- Date: 2020 to 2022
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Data from: Multiscale Modeling Shows How 2'-deoxy-ATP Rescues Ventricular Function in Heart Failure
- Molecular dynamics simulations of myosin (1QVI) carried out with either ATP or dATP bound from the manuscript "Multiscale modeling shows how 2'-deoxy-ATP rescues ventricular function in heart failure"
- Date: 2020 to 2022
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Data from: Selectivity and ranking of tight-binding JAK-STAT inhibitors using Markovian milestoning with Voronoi tessellations
- The data contains the Simulation Enabled Estimation of Kinetic Rates (SEEKR) simulations for the JAK2 and JAK3-ligand complexes with instructions to compute the residence times of the ligands in these complexes.
- Date: 2020 to 2022
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Exploring Earth by Scientific Ocean Drilling: 2050 Science Framework
- The "2050 Science Framework: Exploring Earth by Scientific Ocean Drilling" guides scientists on important research frontiers to pursue to increase understanding of the Earth system while addressing natural and human-caused issues facing society.
- Date: 2020
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Collection
Spherical Sound Search
- Video and audio recordings of virtual reality concerto, mixed reality minuet, and augmented reality rock performances from a concert that presented Extended Reality (XR) musical instrument research.
- Date: 2020-01 to 2020-02
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Collection
Data from: Enhanced surf zone and wave runup observations with hovering drone-mounted LiDAR
- Drone LiDAR data obtained during the SCaRP field experiment of Winter 2019-2020 at Torrey Pines State Beach in San Diego, California, USA.
- Date: 2019-12-14 to 2020-02-24
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Meteorological and Aerosol Measurements near the Salton Sea, California
- This collection contains meteorological and aerosol measurements collected at a field site located near the western shoreline of the Salton Sea, California. These data are designed to study the dynamics and physical properties of dust storms and other aerosol events in the region.
- Date: 2019-12 to present
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Collection
Gas composition and fluorescence data for: Continuous Measurements of Volatile Gases as Detection of Algae Crop Health
- Approximately one month of gas composition data (from m/z 18-215) from three separate carboys averaged into 15-minute bins which was collected by chemical ionization mass spectrometry. Approximately one month of twice daily single point algae fluorescence grab samples as well as continuously collected algae fluorescence during each carboy infection period as described in the manuscript.
- Date: 2019-11-08 to 2019-12-05
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Collection
Structural Tests of Full-Scale Composite Airframe-Representative Structure under Blunt Loading Simulating High-Energy Wide Area Blunt Impact (HEWABI) by Ground Service Equipment
- Datasets from High Energy Wide Area Blunt Impact (HEWABI) specimens testing performed at UCSD between August and December 2019.
- Date: 2019-08 to 2019-12