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Collection

Data from: Observations of Tidally Driven Turbulence over Steep, Small-scale Topography Embedded in the Tasman Slope

In-situ observations from the Tasman Tidal Dissipation Experiment (TTIDE) collected around a small-scale bump embedded in the continental slope of Tasmania.
Date: 2015-01 to 2015-03

Collection

Data from: Ocean Surface Salinity Response to Atmospheric River Precipitation in the California Current System

Oceanic and atmospheric measurements, reanalysis and modeled outputs in the California Current System.
Date: 1992 to 2019

Collection

Data from: Overcrowded Housing Reduces COVID-19 Mitigation Measures and Lowers Emotional Health Among San Diego Refugees from September to November of 2020

Data for the present cross-sectional study were collected between September 2020 and November 2020 as part of PANA’s biannual community survey to address the primary research question: What is the association between housing and COVID-19 vulnerability?
Date: 2020-09 to 2020-11

Collection

Data from: Plankton energy flows using a global size-structured and trait-based model

This collection includes a global 20 year (1990-2009) climatology of diagnostic and prognostic variables for the Size-based Plankton Ecological TRAits (MARBL-SPECTRA) model.
Date: 1990 to 2009

Collection

Data from: QMrebind: Incorporating quantum mechanical force field reparameterization at the ligand binding site for improved drug-target kinetics through milestoning simulations

The data set contains the files necessary to recalculate/reproduce the unbinding rates of ligands for the model host-guest systems and Hsp90-inhibitor complexes in the paper "QMrebind: Incorporating quantum mechanical force field reparameterization at the ligand binding site for improved drug-target kinetics through milestoning simulations."
Date: 2021 to 2023

Collection

Data from: Quantifying influence of human choice on the automated detection of Drosophila behavior by a supervised machine learning algorithm

This data collection contains original movie files, files derived from a tracking program (FlyTracker) and a machine learning-based behavioral classification suite (JAABA), and behavior classifiers for Drosophila social behaviors. These constitute source data of our publication (Leng, X., et al., 2020, in press). With our custom codes (available at https://github.com/asahinak/Leng_Wohl_etal_2020_JAABA_vs_human_annotation), readers can reproduce all the results presented in the article.
Date: 2015-03 to 2018-09

Collection

Data from: Quantitative regional observations of the geological influence on primary sandy beaches

The dataset includes mapped beach elevations, and gravel/bedrock locations in GeoTIFF format.
Date: 2017-10-01 to 2021-03-31

Collection

Data from: Readily Available Primary Aminoboranes as Powerful Reagents for Aldimine Synthesis

Date: 2017 to 2018

Collection

Data from: Retrieval of the Sea Spray Aerosol Mode from Submicron Particle Size Distributions and Supermicron Scattering during LASIC

This collection contains sea spray mode fitting parameters retrieved from Mie inversion of submicron size distributions and supermicron scattering during the LASIC and NAAMES campaigns. Sea spray mode retrieval and Mie scattering codes are also provided.
Date: 2020 to 2022

Collection

Data from Scripps Research Expeditions 1953-2005

Data and documents from Scripps Institution of Oceanography research vessel expeditions from 1953-2005, including geophysical, water column, and sea surface measurements.
Date: 1953 to 2005

Collection

Data from: Seasonal cycle and annual reversal of the Somali Current in an eddy-resolving global ocean model

The dataset includes a subset of model output from a global 0.1-deg CORE-II forced POP simulation near the region of the Arabian Sea, supporting the Journal of Geophysical Research: Oceans article with the same name.
Date: 2005 to 2009

Collection

Data from: SEEKR2: Versatile Multiscale Milestoning Utilizing the OpenMM Molecular Dynamics Engine

This data set contains the files necessary to recreate the results in the paper "SEEKR2: Versatile Multiscale Milestoning Utilizing the OpenMM Molecular Dynamics Engine".
Date: 2020-08 to 2022-03

Collection

Data from: Selectivity and ranking of tight-binding JAK-STAT inhibitors using Markovian milestoning with Voronoi tessellations

The data contains the Simulation Enabled Estimation of Kinetic Rates (SEEKR) simulations for the JAK2 and JAK3-ligand complexes with instructions to compute the residence times of the ligands in these complexes.
Date: 2020 to 2022

Collection

Data from: Short-term variability of atmospheric helium revealed through a cryo-enrichment method

He/N2 observations from Scripps Pier and supplementary O2/N2, Ar/N2 and CO2 data.
Date: 2022-04-23 to 2022-05-25

Collection

Data from: Soft robotic steerable micro-catheter for the endovascular treatment of cerebral disorders

Results of analysis and experiment on steerable microcatheters and microguidewires, including video and raw data.
Date: 2017-01-01 to 2021-06-30

Collection

Data from: Southern California Coastal Response to the 2015-16 El Niño

Airborne lidar datasets collected on 6-October-2015 and 22-March-2016, and processed into 1-m resolution digital elevation models.
Date: 2015 to 2016

Collection

Data from: Spatial Analysis and Heritage Conservation: Leveraging 3-D Data and GIS for Monitoring Çatalhöyük Earthen Architecture

This collection includes the remote sensing dataset recorded at Çatalhöyük, Turkey, between 2012-2017. The deterioration of earthen architecture through time was assessed by comparing these 3-D data and with geo spatial methods.
Date: 2012 to 2017

Collection

Data from: Structural basis for ligand modulation of the CCR2 conformational landscape

This collection contains the molecular dynamics trajectories and analysis scripts used in the paper “Structural basis for ligand modulation of the CCR2 conformational landscape”.
Date: 2017 to 2018

Collection

Data from: Superconductivity Found in Meteorites

This data details the discovery and analysis of superconducting material in two meteorites. These are the first superconducting materials found in extraterrestrial samples and the superconducting phases are characterized as alloys of lead, tin and indium.
Date: 2016 to 2019

Collection

Data from: Technical Note: Stability of tris pH buffer in artificial seawater stored in bags

pH and total dissolved inorganic carbon measurements from tris buffer in artificial seawater stored in gas impermeable bags.
Date: 2018-05-24 to 2019-12-20

Collection

Data from: The Agricultural Productivity Gap

Dataset contains data by country for about 150 countries on GDP per capita, employment share in agriculture, value added share in agriculture, agricultural productivity gap, average hours worked, years of schooling, and human capital.
Date: 1988 to 2011

Collection

Data from: The Impact of Job Training on Temporary Worker Performance: Field Experimental Evidence from Insurance Sales Agents

Data and Stata script used to generate the analysis presented in "The Impact of Job Training on Temporary Worker Performance: Field Experimental Evidence from Insurance Sales Agents."
Date: 2015-01-01 to 2016-02-29

Collection

Data from: The influence of a cross-reef channel on the wave-driven setup and circulation at Ipan, Guam

Currents, waves and water level observations from a shallow and wide shore-attached fringing reef at Ipan, Guam collected over a seven-week study period.
Date: 2011 to 2012

Collection

Data from: The Influence of Cloudiness on Hydrologic Fluctuations in the Mountains of the Western United States

Daily cloud cover indices derived from 4x4 km GOES visible albedo product for snow pillow sites and stream gauges in the mountains of the western U.S.
Date: 1996-01-01 to 2015-12-31

Collection

Data from: The influence of C(sp3)H-Selenium Interactions on the 77Se NMR Quantification of the π-Accepting Properties of Carbenes

The frequency and population analysis results for several 5- and 6-membered carbenes. Structures are unsimplified from those used experimentally.
Date: 2020-02 to 2020-07

Collection

Data from: The Oceanic Barrier Layer in the Eastern Indian Ocean as a Predictor for Rainfall over Indonesia and Australia

This collection consists of E3SMv0 model and variety of observational data and scripts in support of relevant manuscript focused on the relationship of the barrier layer in a region West of Sumatra and the terrestrial rainfall over Indonesia and Australia.
Date: 2018 to 2020

Collection

Data from: The relations between sleep, time of physical activity, and time outdoors among adult women

Exploring the relation between physical activity, time spent outdoors and sleep quality and duration.
Date: 2012-10-10 to 2014-01-13

Collection

Data from: The Seasonal Cycle of Significant Wave Height in the Ocean: Local Versus Remote Forcing

This collection consists of NetCDF files that contain intermediate products derived from observer and modelled data produced by the French Research Institute for Exploitation of the Sea (IFREMER) and Remote Sensing Systems, corresponding to analysis by Colosi et al. (2021).
Date: 1993-01-01 to 2016-12-31

Collection

Data from: Toward Enhanced Reusability: A Comparative Analysis of Metadata for Machine Learning Objects and Their Characteristics in Generalist and Specialist Repositories

This dataset contains data reported in the paper, Labou et al. 2023, which aims to understand how researchers are currently documenting machine learning (ML) research outputs for sharing, and the extent to which repository metadata fields enable reuse of ML objects.
Date: 2021 to 2023

Collection

Data from: Toward probabilistic post-fire debris-flow hazard decision support

For a Southern CA domain, from a 24-hour lead time forecast using the WRF model, on a 1-km grid for 100 ensemble members: 5-minute precipitation output for 12 UTC 8 Jan. 2018 to 12 UTC 10 Jan. 2018 and 12 UTC 1 Feb. 2019 to 12 UTC 3 Feb. 2019.
Date: 2022-01-01 to 2022-02-28

Collection

Data from: Towards Implementing AI Post-processing in Weather and Climate: Proposed Actions from the Oxford 2019 Workshop

We present an open-access experimental testbed database of clean weather and climate data on which traditional methods have been implemented, in order to set benchmarking points for the rapid development of new machine learning methods.
Date: 2018 to 2020

Collection

Data from: Trade-offs in motivating volunteer effort: Experimental evidence on voluntary contributions to science

Data used in the analysis reported in "Trade-offs in motivating volunteer effort: Experimental evidence on voluntary contributions to science" (Lyons & Zhang, 2019).
Date: 2017-06 to 2017-08

Collection

Data from: Unexpected failure of regional marine cloud brightening in a warmer world

Marine cloud brightening simulation output generated using the Community Earth System Model (CESM) version 2.2 described in Wan et al., (submitted).
Date: 2022-04 to 2023-04

Collection

Data from: Urbanization-induced habitat fragmentation erodes multiple components of temporal diversity in a Southern California native bee assemblage

A dataset of bees and plants in coastal sage scrub reserves and habitat fragments in coastal San Diego County, collected by PhD student Keng-Lou James Hung in 2011 and 2012.
Date: 2011-04-12 to 2012-08-13

Collection

Data from: Using a Lagrangian particle tracking model to evaluate impacts of El Niño-related advection on euphausiids in the southern California Current System

These supplemental animations depict particle backtracks for six euphausiid species sampled in the southern California Current System in spring, 2008-2017. The particle model runs four months backward to determine winter water mass origins.
Date: 2007-11-01 to 2017-03-31

Collection

Data from: Validation of geodetic seafloor benchmark stability using structure-from-motion and seafloor pressure data

Data used to validate structure-from-motion underwater as a potential geodetic site imaging tool by confirming 3D modeled measurements with well-constrained heights determined from pressure measurements.
Date: 2017-09-06

Collection

Data from: Wave-Current Interactions at Meso and Submesoscales: Insights from Idealized Numerical Simulations

This collection contains output from idealized simulations of wave-current interactions produced using the wave model WAVEWATCH III and analyzed by Villas Bôas et al. (2020) [doi:10.1175/JPO-D-20-0151.1]. The data can be used in conjunction with the open-source code [https://github.com/biavillasboas/IdealizedWaveCurrent] to reproduce all figures in the paper.
Date: 2019 to 2020

Collection

Data from: Wave-tide interaction for a strongly modulated wave field

This collection contains the data sets and code required to generate each figure presented in the publication Ho, A., Merrifield, S. M., and Pizzo, N. (2022). Wave-tide interaction for a strongly modulated wave field. Journal of Physical Oceanography.
Date: 2020-08-01 to 2021-08-01

Collection

Data from: 'Whale Wave': shifting strategies structure the complex use of critical fjord habitat by humpbacks

This collection contains the data, R programming files, and detailed protocols for various aspects of analysis for the publication: Keen et al. 2016. "Whale Wave": shifting strategies structure the complex use of critical fjord habitat by humpbacks.
Date: 2005 to 2015

Collection

Data from: Who's Asking? Interviewer Coethnicity Effects in African Survey Data

This collection contains the code, data, and output files associated with the article indicated herein.
Date: 2012

Collection

Data Science & Engineering Master of Advanced Study (DSE MAS) Capstone Projects

This collection contains the capstone projects for the Data Science & Engineering (DSE) Master of Advanced Study (MAS) program at UC San Diego.
Date: 2019 to present

Collection

dataMares Collection

DataMares holds a massive amount of fishery, reef, mangrove, and other data pertaining to the ecology of Mexico, particularly coastal and marine ecosystems of the Gulf of California, and delivers this information in an interactive and digestible manner.
Date: 1998 to present

Collection

dataMares: Ecological Monitoring

This collection contains databases from regular surveys conducted to track annual changes in the structure, function, and health of marine ecosystems, as well as organisms like fishes and invertebrates at numerous island and coastal sites.
Date: 1998 to present

Collection

dataMares: Ecosystem Dynamics

The datasets in this collection are used for analyses on relationships between different ecosystems, as well as humans and the habitats surrounding us, to elucidate the impact that anthropogenic activities have on the environment.
Date: 2014 to present

Collection

dataMares: Fisheries

This collection contains robust, high-quality scientific information related to Mexico-specific ocean fisheries and their relationship to marine reserves, coastal and marine ecosystems, and climate change. It also contains datasets with information on fishing activities collected with the participation of local fishermen.
Date: 1950-01-01 to present

Collection

Digital Media Lab

This collection includes a range of 3D media projects created by the UC San Diego Library Digital Media Lab.
Date: 2020-01-02

Collection

EarthCube Organization Materials

This collection of materials managed by the EarthCube Coordination Office includes organizational and governance documents, white papers, presentations, reports, and event proceedings produced by EarthCube leaders, staff, and committee members.
Date: 2011 to present

Collection

EarthCube User Scenario Collection

A collection of earth scientists' descriptions of their cyberinfrastructure needs, developed for the NSF EarthCube program.
Date: 2015-05-01 to 2016-09-01

Collection

Exploring Earth by Scientific Ocean Drilling: 2050 Science Framework

The "2050 Science Framework: Exploring Earth by Scientific Ocean Drilling" guides scientists on important research frontiers to pursue to increase understanding of the Earth system while addressing natural and human-caused issues facing society.
Date: 2020

Collection

Flat Panel Impact and Residual Strength Testing and Characterization by Ultrasonic and X-Ray Computed Tomography Non-Destructive Evaluation

Flat composite panel impacts and residual strength testing. Impact damage characterized by X-ray computed tomography and ultrasonic scanning and residual strength testing characterized by digital image correlation.
Date: 2017-07 to 2017-09

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