Microscopy product ID: 12
2D Image
Description | Zero tilt image from a single tilt series through a 4 ?m thick section of a medium spiny neuron dendrite that has been intracellularly injected and photooxidized |
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Description | Tar file containing unaligned compressed tilt images (*.f.gz) and the aligned, cropped images (*.crop) in Suprim format. The fiducial mark file (osaka3.fido) and origin file (osaka3.fido.origin) used to align the tilt images using the program Xfido are also included. |
Animation
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Description | Animation through the aligned tilt series |
Segmentation
Description | manual segmentationi using Xvoxtrace; surfaced with Synu |
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Description | Tar file containing original trace file with manual contours (osaka3.trace) produced by Xvoxtrace v 2.9 and the surface renderings of the dendritic shaft (shaft.synu) and the population of dendritic spines (spine.synu) in Synu format, along with the Viewdata file required for viewing with Synuview. |
Reconstruction
Description | Maximum intensity projection of a tomographic reconstruction of stained dendrite from rat neostriatum in a 4 um section. |
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- Collection
- Cite This Work
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Martone, Maryann; Yamada, Naoko; Arbuthnott, Gordun; Ingham, Cali; Young, Stephen J. (2017). Microscopy product ID: 12. In Cell Centered Database. UC San Diego Library Digital Collections. https://doi.org/10.6075/J0V69JC7
- Creation Date
- Microscopy product: 2000-01-31. Project: 1992-01-01.
- Date Issued
- 2017
- Research Team Head
- Researchers
- Technical Details
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Product type: SINGLE TILT. Microscopy type: UHVEM. Instrument: Hitachi UHVEM
Strain: Sprague Dawley
- Funding
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NIH
- Series
- Scientific Name
- Anatomy
- Topic
Formats
View formats within this collection
- Language
- No linguistic content; Not applicable
- Related Resource
- Microscopy product 12 at the Cell Centered Database: https://doi.org/10.7295/W9CCDB12
Other version
- License
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Creative Commons Attribution 4.0 International Public License
- Rights Holder
- UC Regents
- Copyright
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Under copyright (US)
Use: This work is available from the UC San Diego Library. This digital copy of the work is intended to support research, teaching, and private study.
Constraint(s) on Use: This work is protected by the U.S. Copyright Law (Title 17, U.S.C.). Use of this work beyond that allowed by "fair use" or any license applied to this work requires written permission of the copyright holder(s). Responsibility for obtaining permissions and any use and distribution of this work rests exclusively with the user and not the UC San Diego Library. Inquiries can be made to the UC San Diego Library program having custody of the work.
- Digital Object Made Available By
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Research Data Curation Program, UC San Diego, La Jolla, 92093-0175 (https://lib.ucsd.edu/rdcp)
- Last Modified
2023-05-22