Microscopy product ID: 6334
2D Image
Description | Electron micrograph of a 0.25 um section through a pyramidal neuron from the cerebral cortex of a patient with Alzheimer's disease. The specimen was prepared from biopsy material obtained several decades ago. |
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Description | Tar file containing the unaligned scanned images at full resolution in tiff format |
Segmentation
Description | Manual segmentation of subcellular structures within a pyramidal neuron using Jinx 1.5 |
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Description | Tar file containing the trace file in Jinx format and the surfaced objects in synu format. |
Reconstruction
Description | Single image through a serial section electron microscopic reconstruction of the cell body of a cortical pyramidal neuron from a biopsy sample obtained from the cortex of a patient with Alzheimer's disease. |
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Description | Aligned stack of serial section images in IMOD MRC format. Images were aligned through manual assignment of fiducial marks, followed by non-linear alignment in IMOD using Midas, available in IMOD. |
Animation
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Description | Animation through the slices of a serial section electron microscopic reconstruction of the cell body of a cortical pyramidal neuron from a biopsy sample obtained from the cortex of a patient with Alzheimer's disease. |
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- Cite This Work
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Ellisman, Mark H.; Ranganathan, Rama; Deerinck, Thomas J.; Young, Stephen J.; Hessler, David; Terry, Robert D. (2017). Microscopy product ID: 6334. In Cell Centered Database. UC San Diego Library Digital Collections. https://doi.org/10.6075/J0ZK5GGZ
- Creation Date
- Experiment: 1987-01-01.
- Date Issued
- 2017
- Research Team Head
- Researchers
- Technical Details
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Male
Product type: SERIAL SECTION. Microscopy type: TEM. Instrument: JEOL 100CX
- Funding
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National Institutes of Health
- Series
- Scientific Name
- Anatomy
- Topic
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- Language
- No linguistic content; Not applicable
- Related Resources
- Microscopy product 6334 at the Cell Centered Database: https://doi.org/10.7295/W9CCDB6334
- Ellisman MH, Ranganathan R, Deerinck TJ, Young SJ, Terry R, and Mirra S (1987). Neuronal fibrillar cytoskeleton and endomembrane system organization in Alzheimers disease, In Alterations in the Neuronal Cytoskeleton in Alzheimer Disease, GP Perry (Ed,). pp, 61-73, Plenum Press, New York. https://doi.org/10.1007/978-1-4613-1657-2_6
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Reference
- License
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Creative Commons Attribution 4.0 International Public License
- Rights Holder
- UC Regents
- Copyright
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Under copyright (US)
Use: This work is available from the UC San Diego Library. This digital copy of the work is intended to support research, teaching, and private study.
Constraint(s) on Use: This work is protected by the U.S. Copyright Law (Title 17, U.S.C.). Use of this work beyond that allowed by "fair use" or any license applied to this work requires written permission of the copyright holder(s). Responsibility for obtaining permissions and any use and distribution of this work rests exclusively with the user and not the UC San Diego Library. Inquiries can be made to the UC San Diego Library program having custody of the work.
- Digital Object Made Available By
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Research Data Curation Program, UC San Diego, La Jolla, 92093-0175 (https://lib.ucsd.edu/rdcp)
- Last Modified
2023-05-22