Wood, Christopher S.; Schmitz, Karl R.; Bessman, Nicholas J.; Setty, Thanuja Gangi; Ferguson, Kathryn M.; Burd, Christopher G. (2021). CIL:13459, Saccharomyces cerevisiae S288c. In Cell Image Library. UC San Diego Library Digital Collections. Dataset. https://doi.org/10.6075/J01J98FT

Intracellular localization of GFP-Vps74 in S. cerevisiae pik1-83 temperature-conditional strain grown at restrictive temperature of 37C. In pik1-83 mutant after a 30 minute incubation at the restrictive temperature, GFP-Vps74 loses punctate localization and is mostly in the cytosol and nucleus. The Golgi-localized PtdIns 4-kinase in yeast is composed of the Pik1 catalytic subunit and a myristoylated calcium-binding protein, Frq1. Vps74 is essential to maintain glycosyltransferases in the Golgi and results in this study reveal a previously unrecognized PtdIns4P-binding site in Vps74/GOLPH3 family proteins and link Pik1 signaling to retention of Golgi-resident proteins. Cells grown in liquid medium were mounted in growth medium and 3D image stacks were collected at 0.4-µm z increments on a DeltaVision workstation (Applied Precision) based on an inverted microscope (IX-70; Olympus) using a 100× NA 1.4 oil immersion lens. Images were captured at 23C with a 12-bit CCD camera (CoolSnap HQ; Photometrics) and deconvolved using the iterative-constrained algorithm (Agard, 1984) and the measured point spread function. One image from the approximate center of z stack is shown in Fig1A Vps74/pik1-83 37C panel in J Cell Biol. 187: 967-975. 2009. Images in Fig 1A include CIL#s 13439, 13440, 13441, 13442, 13443, 13444, 13445, 13446, 13447, 13448, 13458, 13459.

• 2021

• Bessman, Nicholas J.
• Burd, Christopher G.
• Ferguson, Kathryn M.
• Schmitz, Karl R.
• Setty, Thanuja Gangi
• Wood, Christopher S.

Preparation: living tissue
Relation to intact cell: whole mounted tissue
Item type: recorded image
Imaging mode: fluorescence microscopy
Parameter imaged: fluorescence emission
Source of contrast: distribution of a specific protein
Visualization methods: EGFP
Processing history: constrained iterative deconvolution
Data qualification: Processed;spatialmeasurements;intensitiesquantitation

• Cell Image Library Group ID: 6596

• Saccharomyces cerevisiae S288c

• Cytosol
• Extrinsic to membrane
• Golgi apparatus
• Nucleus
• Trans-Golgi network

• 1-phosphatidylinositol 4-kinase activity
• Enzyme binding
• Phosphatidylinositol-4-phosphate binding
• Phosphatidylinositol-mediated signaling
• Pik1-83
• Protein localization in Golgi apparatus
• Protein transport
• Retrograde vesicle-mediated transport, Golgi to ER

• data
• image

• No linguistic content; Not applicable

Samplenumber: 13459

Doi: https://doi.org/10.6075/J01J98FT

Source data

• Source Record in the Cell Image Library: https://doi.org/10.7295/W9CIL13459

Reference

• J Cell Biol. 187: 967-975. 2009. https://www.ncbi.nlm.nih.gov/pubmed/?term=20026658

Other resource

• BioStudies (previously JCB DataViewer): https://www.ebi.ac.uk/biostudies/studies/

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2022-08-12