Library Digital Collections
Library Digital Collections

CalCOFI Cruises (CTD) (Instrument ID: IFCB151)

Component

Additional metadata files

File Size
  • 9.38 KB
File Format
  • ZIP Format
Description

This folder contains additional sample-specific metadata not included in the raw data files. The metadata includes indicators for samples that failed to meet QC criteria (denoted by a skip_flag set to 1) and the geographical coordinates (latitude and longitude) for ship-based sample collections only. The metadata is provided in a .csv file named metadata_YYYY-MM-DD.csv, where YYYY-MM-DD reflects the date the metadata was added, for version control. Data users should take note of the specific metadata.csv file used in their analyses.

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2022 Raw data

File Size
  • 1.2 GB
File Format
  • ZIP Format
Description

For each sample, the IFCB generates (i) a .hdr file containing information on instrument setup, sample metadata, and headers for the .adc file, (ii) an .adc file with tabular data on the captured ROIs, and (iii) a .roi file containing the images of ROIs themselves.

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2024 Raw data

File Size
  • 547 MB
File Format
  • ZIP Format
Description

For each sample, the IFCB generates (i) a .hdr file containing information on instrument setup, sample metadata, and headers for the .adc file, (ii) an .adc file with tabular data on the captured ROIs, and (iii) a .roi file containing the images of ROIs themselves.

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Collection
Cite This Work

Allen, Andrew E. (2025). CalCOFI Cruises (CTD) (Instrument ID: IFCB151). In California Imaging FlowCytobot Network (CA IFCB Network). UC San Diego Library Digital Collections. Accessed on [Date of Download]. https://doi.org/10.6075/J05Q4WFB

Description

Type of deployment: Offshore, topsite (ship-based)
Intake depth: Varies

Data Quality Control: data has not yet undergone QC.

Station locations corresponding to each collected IFCB sample are listed in the metadata.csv file.

Scope And Content

Check back in the future for updates to this dataset.

Date Collected
  • 2022-08-14 to 2024-12-31
Date Issued
  • 2025
Principal Investigator
Host Institution
Note

Contacts:
Principal Investigator: Andrew Allen (aallen@ucsd.edu)

Funding

NOAA Ecology and Oceanography of Harmful Algal Blooms (ECOHAB) Program

Geographics
Topics

Formats

View formats within this collection

Language
  • English
Identifier

Doi: https://doi.org/10.6075/J05Q4WFB

Related Resource
License

Creative Commons Attribution 4.0 International Public License

Rights Holder
  • UC Regents
Copyright

Under copyright (US)

Use: This work is available from the UC San Diego Library. This digital copy of the work is intended to support research, teaching, and private study.

Constraint(s) on Use: This work is protected by the U.S. Copyright Law (Title 17, U.S.C.). Use of this work beyond that allowed by "fair use" or any license applied to this work requires written permission of the copyright holder(s). Responsibility for obtaining permissions and any use and distribution of this work rests exclusively with the user and not the UC San Diego Library. Inquiries can be made to the UC San Diego Library program having custody of the work.

Digital Object Made Available By

Research Data Curation Program, UC San Diego, La Jolla, 92093-0175 (https://lib.ucsd.edu/rdcp)

Last Modified

2025-11-20