Microscopy product ID: 6843
2D Image
Description | Wide field fluorescent image of cultured neuroblastoma cells labeled with phalloidn FITC (green) and DAPI (blue) nuclear stain. |
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Description | Zip file containing full resolution single channel 12 bit images. For each image, F01_*w1.TIF corresponds to the phalloidin channel and F01_*w2.TIF to the DAPI channel. |
Segmentation
Description | Manual segmentation of cell and nuclear boundaries of double labeled cultured neurons, generated using Adobe Photoshop |
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Description | Manually segmented files in tiff format. The name of the binary files indicates the corresponding original image, available for download through the 2D Image panel, e.g., F01_120_GT_01.tiff contains the "ground truth (GT)" masks for image file F01_120.tiff. Each image may have more than one mask file generated for it, indicated by the final number, e.g., F01_120_Gt_02.tiff is the second mask generated for F01_120.tiff. |
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- Cite This Work
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Yu, Weimiao; Lee, Hwee Kuan; Hariharan, Srivats; Bu, Wen Yu; Ahmed, Sohail (2017). Microscopy product ID: 6843. In Cell Centered Database. UC San Diego Library Digital Collections. https://doi.org/10.6075/J09P31GZ
- Date Issued
- 2017
- Research Team Head
- Researchers
- Technical Details
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Product type: SURVEY. Microscopy type: EPIFLUORESCENT. Instrument: Zeiss
- Series
- Scientific Name
- Anatomy
- Topic
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- Language
- No linguistic content; Not applicable
- Related Resources
- Yu W, Lee HK, Hariharan S, Bu W, Ahmed S (2010). Evolving generalized Voronoi diagrams for accurate cellular image segmentation. Cytometry Part A, 77A(4):379-386. PubMed: https://www.ncbi.nlm.nih.gov/pubmed/20169588; Cytometry Part A. https://doi.org/10.1002/cyto.a.20876
- Microscopy product 6843 at the Cell Centered Database: https://doi.org/10.7295/W9CCDB6843
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- License
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Creative Commons Attribution 4.0 International Public License
- Rights Holder
- UC Regents
- Copyright
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Under copyright (US)
Use: This work is available from the UC San Diego Library. This digital copy of the work is intended to support research, teaching, and private study.
Constraint(s) on Use: This work is protected by the U.S. Copyright Law (Title 17, U.S.C.). Use of this work beyond that allowed by "fair use" or any license applied to this work requires written permission of the copyright holder(s). Responsibility for obtaining permissions and any use and distribution of this work rests exclusively with the user and not the UC San Diego Library. Inquiries can be made to the UC San Diego Library program having custody of the work.
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Research Data Curation Program, UC San Diego, La Jolla, 92093-0175 (https://lib.ucsd.edu/rdcp)
- Last Modified
2023-05-22