Browse By Collection

Collection

Data from: Airborne observations of surface winds, waves and currents from meso to submesoscales

Coincident and collocated high-resolution observations of surface currents and directional properties of surface waves collected from an airborne instrument, the Modular Aerial Sensing System (MASS), collected off the coast of Southern California.
Date: 2021-05-18 through 2021-11-05

Collection

Data from: Airborne remote sensing of concurrent submesoscale dynamics and phytoplankton

This archive contains the code and data needed to generate the figures in the publication: "Airborne remote sensing of concurrent submesoscale dynamics and phytoplankton" (Lang, Sarah E.; Omand, Melissa M.; Lenain, Luc). Data presented was collected as part of the Submesoscale Ocean Dynamics Experiment (S-MODE).
Date: 2021-10-29 to 2021-10-30

Collection

Data from: Allostery through the Computational Microscope: cAMP Activation of a Canonical Signalling Domain

This collection contains the molecular dynamics trajectories scripts and models used in the paper “Allostery through the computational microscope: cAMP activation of a canonical signalling domain”.
Date: 2014-08-24

Collection

Data from: Arctic ice-ocean interactions in an 8-to-2 kilometer resolution global model

This data collection represents all UH8to2 model data used for the publication "Arctic ice-ocean interactions in an 8-to-2 kilometer resolution global model". This includes ocean and sea ice characteristics from the 2017-2020 UH8to2 model run.
Date: Model representation: 2017 to 2020

Collection

Data from: Are AI weather models learning atmospheric physics? A sensitivity analysis of cyclone Xynthia

This collection contains the data for the manuscript titled "Are AI Weather Models Learning Atmospheric Physics? A Sensitivity Analysis of Cyclone Xynthia", which is necessary to reproduce the results presented.
Date: 2024

Collection

Data from: Autumn precipitation: the competition with Santa Ana winds in determining fire outcomes in southern California

This dataset includes two versions of the Santa Ana Wind Regional Index (SAWRI) and Livneh precipitation data from 1948-2018.
Date: Compiled: 1948 to 2018

Collection

Data from: Building Cultural Heritage Resilience through Remote Sensing: An Integrated Approach using Multi-temporal Site Monitoring, Datafication, and Web-GL Visualization

This collection integrates highly accurate 3D snapshots of Bodie's historic buildings before/after disturbance, or post-restoration, and other 3D geospatial data that were used to monitor and digitally preserve important cultural resources at Bodie California State Historic Park.
Date: 2015 and 2020

Collection

Data from: Calibrated absolute seafloor pressure measurements for geodesy in Cascadia

Raw and corrected pressure data from campaign-style surveys of absolute calibrated sea pressure using an Absolute Self-Calibrating Pressure Recorder (ASCPR) in the Cascadia subduction zone from 2014 to 2017.
Date: 2014 to 2017

Collection

Data from: Carbon and Oxygen Isotopic Fractionation in the Products of Low-Temperature VUV Photodissociation of Carbon Monoxide

Carbon and oxygen isotopic fractionation during photodissociation by VUV photons. This Matlab based model only calculates the isotope effect in the self-shielding process and not by any other means (e.g., predissociation). Data files are included.
Date: 2016 to 2018

Collection

Data from: Carbonic Anhydrases, EPF2 and a Novel Protease Mediate CO2 Control of Stomatal Development

RNA-Seq experiments analyzing the Arabidopsis response to low and elevated carbon dioxide growing conditions were conducted to capture early signaling events as seedlings were adapting to stress.
Date: 2012 to 2013

Collection

Data from: Characterizing Non-phase-locked Tidal Currents in the California Current System using High-frequency Radar

Processed time series from HFR, power spectra from HFR, and fitted harmonic constituents from analyzed HFR. Data from a bottom pressure sensor used in suppl. Scripts used in the study to analyze and process data and to make visualizations.
Date: 2012-01-01 to 2021-04-01

Collection

Data from: Climate change intensification of horizontal water vapor transport in CMIP5

The dataset contains simulations of water vapor transport from 22 CMIP5 models including the historical, RCP4.5, and RCP8.5 runs.
Date: 2014 to 2015

Collection

Data from: Cobble Tracking Observations at Torrey Pines State Beach, CA, USA

Wave data and cobble locations at Torrey Pines State Beach, San Diego, California.
Date: 2021 to 2023

Collection

Data from: Commitment Problems or Bidding Wars? Rebel Fragmentation as Peace Building

This project uses an original dataset of field commanders in post-civil war Tajikistan to show that warlords from the victorious faction were as likely to be purged from the ruling coalition in a given year as warlords from the defeated faction.
Date: 2012

Collection

Data from: Continuous Evaluation of Ligand Protein Predictions: A Weekly Community Challenge for Drug Docking

All structures and RMSDs used in Continuous Evaluation of Ligand Protein Predictions: A Weekly Community Challenge for Drug Docking are provided here.
Date: 2017 to 2018

Collection

Data from: Contrasting Local and Long-Range-Transported Warm Ice-Nucleating Particles During an Atmospheric River in Coastal California, USA

Data, modeling results and analyses supporting research into meteorology and ice nucleating particles.
Date: 2016-03-05 to 2018-05-01

Collection

Data from: Cusp and mega cusp observations on a mixed sediment beach

The dataset contains elevation rasters and gravel/cobble locations (North American Datum of 1983 (NAD 83), North American Vertical Datum of 1988 (NAVD 88)).
Date: 2018 to 2019

Collection

Data from: Cyclic(Alkyl)(Amino)Carbene Ligands Enable Cu-Catalyzed Markovnikov Protoboration and Protosilylation of Terminal Alkynes: A Versatile Portal to Functionalized Alkenes

Included are the Gaussian output files (.chk, .fchk, and .log) from DFT calculations on the free carbenes explored in the protoboration and protosilylation of alkynes.
Date: 2020 to 2021

Collection

Data from: Diminished efficacy of regional marine cloud brightening in a warmer world

Marine cloud brightening simulation output generated using the Community Earth System Model (CESM) version 2.2 described in Wan et al. (accepted).
Date: 2022-04 to 2023-12

Collection

Data from: DNA damage induced during mitosis undergoes DNA repair synthesis

A study of the DNA repair response to laser-induced DNA damage in selected mitotic chromosomes.
Date: 2010 to 2019

Collection

Data from: Drift-Corrected Seafloor Vertical Deformation at Axial Seamount 2013-2014

Data from a Self-Calibrating Pressure Recorder (SCPR) deployed at Axial Seamount from 2013 to 2015. This is seafloor height change (cm), converted from pressure (kPa), corrected for ocean tides and pressure gauge drift.
Date: 2015-08-25

Collection

Data from: Eddy-induced acceleration of Lagrangian floats

Simulated Argo float positions computed using velocities from the Estimating the Circulation and Climate of the Ocean, Phase II (ECCO2) project.
Date: 2016 to 2019

Collection

Data from: Effect of atmospheric forcing resolution on simulated mixed layer depth in the North Pacific

This dataset contains daily output from two eddying ocean simulations in the North Pacific. The two experiments have the same configuration except for the atmospheric forcing resolution.
Date: 2014 to 2018

Collection

Data from: Electrostatic interactions as mediators in the allosteric activation of PKA RIalpha

Molecular dynamics input files, trajectories and analysis scripts used in the paper "Electrostatic interactions as mediators in the allosteric network of PKA RIalpha".
Date: 2015-09-15

Collection

Data from: Enhanced surf zone and wave runup observations with hovering drone-mounted LiDAR

Drone LiDAR data obtained during the SCaRP field experiment of Winter 2019-2020 at Torrey Pines State Beach in San Diego, California, USA.
Date: 2019-12-14 to 2020-02-24

Collection

Data from: Episodic Southern Ocean heat loss and its mixed layer impacts revealed by the furthest south multi-year surface flux mooring

This dataset contains Quality Controlled daily mean air-sea heat flux estimates from the NSF Ocean Observatories Initiative Southern Ocean mooring site for the period 2015 to 2017, as used in the analysis of Ogle et al. 2018 (doi:10.1029/2017GL076909)
Date: 2015 to 2017

Collection

Data from: Evaluating the trustworthiness of explainable artificial intelligence (XAI) methods applied to regression predictions of Arctic sea ice motion

This dataset provides processed satellite and reanalysis data on sea-ice motion in the Arctic, along with statistical model predictions. It also includes code for processing the data, aimed at facilitating explainable AI analysis of model predictions.
Date: 1989 to 2021

Collection

Data from: Exploration and Explanation in Computational Notebooks

Analysis of approximately 1.25 million Jupyter Notebooks downloaded from public repositories on GitHub in July 2017.
Date: July 2017

Collection

Data from: Feasibility of continuous fever monitoring using wearable devices

Sixty-five continuous days of data at one-minute resolution covering fifty individuals reporting COVID-19 infections starting on day 45 in the data set.
Date: 2020-03 to 2020-06

Collection

Data from: Flooding Projections due to Groundwater Emergence Caused by Sea Level Variability

Processed RBR solo pressure data, CTD density profiles, and atmospheric pressure-corrected GWT measurements from four groundwater monitoring wells in Imperial Beach, CA, (Dec 2021-May 2024) used to study sea level impact on flood risks.
Date: 2021-12-08 to 2024-05-14

Collection

Data from: Four Atmospheric Circulation Regimes Over the North Pacific and Their Relationship to California Precipitation on Daily to Seasonal Timescales

This dataset contains four indices of daily atmospheric variability associated with four circulation regimes over the North Pacific, which have been identified as essential drivers of atmospheric river landfall variability and California precipitation.
Date: 2018

Collection

Data from: Genuine Carbene Versus Carbene-Like Reactivity

Optimized geometries, frequencies, and single point calculations for reactants, products, reaction intermediates, and transition states involved in forming cyclic(aryl)(amino)carbene-metal complexes and decomposition products.
Date: 2023-04 to 2023-11

Collection

Data from: Harmonic Analysis of Non-Phase-Locked Tides with Red Noise Using the red_tide Package

Data, functions, and scripts associated with "Harmonic Analysis of Non-Phase-Locked Tides with Red Noise Using the red_tide Package" (Kachelein et al. 2022).
Date: 2010 to 2021

Collection

Data from: Harnessing AI data-driven global weather models for climate attribution: An analysis of the 2017 Oroville Dam extreme atmospheric river

This study explores storyline-based climate attribution with AI global weather models, whose short simulation inference times allow one to generate real-time attributions when public attention is heightened. It focuses on the atmospheric river episode of February 2017 that contributed to the Oroville Dam spillway incident in Northern California. Attributions are compared to those from a dynamical model, which represent a plausible "pseudo-reality". This collection contains the data used and generated in the aforementioned study.
Date: 2017-02-05 to 2017-02-11

Collection

Data from: Ice break-up controls dissipation of wind-waves across Southern Ocean sea ice

In situ wave observations and WaveWatch III model output for Ardhuin et al. (2020).
Date: 2018-05 to 2018-07

Collection

Data from: Identification of weakly- to strongly-turbulent three-wave processes in a micro-scale system

Height of water surface at center of 40uL sessile drop at 115,200fps for ~1s during actuation by ~7MHz thickness mode ultrasound. Each data set was taken at the indicated ultrasound input power level (from 0-350 mW).
Date: 2021-11-28 to 2022-01-18

Collection

Data from: Immersive Visualization and Curation of Archaeological Heritage Data: Çatalhöyük and the Dig@IT App

The purpose of this collection is to curate online all the 3D models and related metadata representing the three-dimensional stratigraphy of Çatalhöyük Building 89 as they are disseminated through the open source virtual reality application Dig@IT.
Date: 2011 to 2015

Collection

Data from: Impact of Atmospheric River Reconnaissance Dropsonde Data on the Assimilation of Satellite Data in GFS

This collection are the satellite radiance data from the data denial experiments for the 2020 atmospheric river reconnaissance. The data are generated by the NCEP GDAS system during January 24 – March 18, 2020, corresponding to analyses in Zheng et al. 2022.
Date: 2020-01-24 to 2020-03-18

Collection

Data from: Impacts of Dropsonde Observations on Forecasts of Atmospheric Rivers and Associated Precipitation in the NCEP GFS and ECMWF IFS models

ECMWF and NCEP IVT and precipitation data from control forecasts and data denial forecasts (without dropsondes assimilated) for Atmospheric River Reconnaissance (AR recon) 2019 and 2020.
Date: 2019-02-01 to 2019-03-01 and 2020-01-24 to 2020-03-16

Collection

Data from: Implications of Byproduct Chemistry in Nanoparticle Synthesis

Absorption spectra of organic byproducts of tetrachloroaurate reduction by 2-(N-morpholino)ethanesulfonate (MES) were calculated via time-dependent density functional theory. These include small organic molecules, organic MES oligomers, and Au(I) complexes.
Date: 2016 to 2018

Collection

Data from: Improved Forecast Skill through the Assimilation of Dropsonde Observations from the Atmospheric River Reconnaissance Program

This dataset are initial and boundary conditions generated by West-WRF implemented at Scripps Institution of Oceanography of UC San Diego for the Atmospheric River Reconnaissance dropsonde data denial experiments described in Zheng et al. 2021 (JGR). With this dataset, one should be able to repeat the WRF simulations for the NoDROP and WithDROP experiments using WRF V3.9.1.1.
Date: 2016-02-14 to 2019-03-01

Collection

Data from: Increasing STEM Undergraduate Participation in Innovative Activities: Field Experimental Evidence

Measures of performance on an innovation contest by whether or not participants receive randomized encouragement, and whether participants self-selected into the contest or joined after receiving a monetary inducement for doing so.
Date: 2017-01 to 2017-07

Collection

Data from: Inferring free surface disturbance properties from Kelvin wakes using convolutional neural network

Surface elevation data for training the convolutional neural networks.
Date: 2023

Collection

Data from: Influence of Carbene and Phosphine Ligands on the Catalytic Activity of Gold Complexes in the Hydroamination and Hydrohydrazination of Alkynes

Several carbene structures and reaction intermediates for the Au catalyzed hydroamination of alkynes were calculated with Density Functional Theory Methods.
Date: 2019 to 2020

Collection

Data from: Instrumented Wave Gliders for Air-Sea Interaction and Upper Ocean Research

This collection regroups data sets collected during four major field programs from 2013 to 2020 from a fleet of Wave Gliders specifically designed and instrumented for air-sea interaction and upper ocean observations by the Air-Sea Interaction Laboratory at Scripps Institution of Oceanography.
Date: 2013 to 2020

Collection

Data from: Interannual variations in meltwater input to the Southern Ocean from Antarctic ice shelves

Height changes and basal melt rates of Antarctic ice shelves from satellite remote sensing, 1994–2018.
Date: 1994 to 2018

Collection

Data from: Internal tide structure and temporal variability on the reflective continental slope of southeastern Tasmania

This collection contains in situ data (from 3 moorings and 1 CTD/LADCP station) from the Tasman Tidal Dissipation Experiment (T-TIDE) that was analyzed in Marques et al. (2020).
Date: From 2015-01 to 2015-03

Collection

Data from: Is the Mediterranean the New Rio Grande? U.S. and E.U. Immigration Pressures in the Long Run

This project uses a gravity-style model to project bilateral migration flows for the next 40 years. It shows that Europe—unlike the US—will face substantial, demographically driven migration pressures from across the Mediterranean for decades to come.
Date: 2016-01-01 to 2016-05-31

Collection

Data from: Latent profile analysis of objectively measured sleep, physical activity, and sedentary time and associations with health in adult women

This dataset represents the analysis variables for a group of 372 women collected at 4 different sites across the United States, including sleep quality, physical activity and sedentary behaviors.
Date: 2012-10-10 to 2014-01-13

Collection

Data from: Lineage tracing shows that cell size asymmetries predict the dorsoventral axis in the sea star embryo

Microscopy data relative to measurements of cell sizes in early embryos of 3 echinoderm species (Patiria miniata, Lytechinus pictus and Patiriella regularis) and to lineage tracing experiments in the sea star Patiria miniata.
Date: 2018 to 2022

Collection

Data from: Machine learning for daily forecasts of Arctic sea-ice motion: an attribution assessment of model predictive skill

MATLAB R2021b, Python and bash files used for data download and analysis. Processed data and MATLAB R2021b plotting files.
Date: 1989 to 2021

Collection

Data from: Measuring Estuarine Total Exchange Flow from Discrete Observations

Matlab code for calculating Total Exchange Flow (TEF) using data from the three estuary models. Calculation scripts for five different methods as described in “Measuring Estuarine Total Exchange Flow from Discrete Observations” are included.
Date: 2005 to 2012

Collection

Data from: Measuring Seafloor Strain with an Optical Fiber Interferometer

A 95.5 day long record of earth strain collected on the seafloor 95 km offshore Oregon was collected (ocean depth was 1910 m). The instrument used was a 200-m-long optical fiber cable, stretched between two anchors in an east-west line.
Date: 2015-10-24 to 2016-01-27

Collection

Data from: Mechanisms of heat flux across the Southern Greenland continental shelf in 1/10° and 1/12° ocean/sea ice simulations

Volume and heat fluxes across the Greenland continental shelf in two eddy-active coupled ocean/sea-ice simulations.
Date: 2005 to 2009

Collection

Data from: Mesopelagic fishes dominate otolith record of past two millennia in the Santa Barbara Basin

Two data files for Santa Barbara Basin, (1) individual fossil otolith data (geometric measurements, shape characteristics and elemental composition); (2) time series of otolith deposition rate and climate proxies.
Date: 1993 to 2015

Collection

Data from: Metabolic rates in the Agua Hedionda Lagoon during the 2020 Southern California red tide event

A time series from autonomous SeapHOx sensors (pH, dissolved oxygen (DO), salinity, temperature, and pressure) in the Agua Hedionda Lagoon, captured baseline conditions in 2018 and the effects of a massive red tide occurring along the Southern & Baja California coast during the spring of 2020.
Date: 2018-11-02 to 2018-12-24 and 2020-02-05 to 2020-06-14

Collection

Data from: Multi-Source Feature Fusion for Object Detection Association in Connected Vehicle Environments

This dataset contains labeled virtual and real-world examples of object detection association in a connected vehicle environment.
Date: 2020 to 2022

Collection

Data from: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning

The kinetic rate constants of four biochemically relevant ligand-receptor systems were estimated and described in a publication. This collection includes input files, output files, trajectories, and statistics associated with the study.
Date: 2013 to 2015

Collection

Data from: Multiscale Modeling Shows How 2'-deoxy-ATP Rescues Ventricular Function in Heart Failure

Molecular dynamics simulations of myosin (1QVI) carried out with either ATP or dATP bound from the manuscript "Multiscale modeling shows how 2'-deoxy-ATP rescues ventricular function in heart failure"
Date: 2020 to 2022

Collection

Data from: Multiscale Simulations Examining Glycan Shield Effects on Drug Binding to Influenza Neuraminidase

The input and output Brownian dynamics trajectories associated with this study.
Date: 2017 to 2020

Collection

Data from: Near-Inertial Surface Currents Around Islands

This collection contains numerical model output from a linear 1.5-layer reduced gravity model. These simulations are presented in Siegelman et al. (2022), which examines the behavior of near-inertial surface currents around circular islands.
Date: 2019 to 2021

Collection

Data from: NetSci: A Library for High Performance Biomolecular Simulation Network Analysis Computation

This collection contains trajectory and molecular dynamics simulation output data for NetSci: A Library for High Performance Biomolecular Simulation Network Analysis Computation.
Date: 2022-01-01 to 2024-04-01

Collection

Data from: North American Monsoon Impacts Southern California’s Coastal Low Clouds

This collection contains data from "North American Monsoon Impacts Southern California’s Coastal Low Clouds" (Clemesha et al. 2023). Data files include: satellite-derived Coastal Low Cloudiness (CLC) for May - September 1996 - 2020, seasonal cycle fit of CLC used to create daily anomalies, San Diego airport cloud cover, precipitable water content from 850 to 300 hPa from observations in southern and northern California, a previously published single column model radiative scheme with input and outputs files used in this study.
Date: May through September, 1996 to 2020

Collection

Data from: Observations and Modeling of Ocean Circulation in the Seychelles Plateau Region

This collection contains raw and processed data from a variety of velocity, pressure, temperature and salinity sensors deployed from December 2016 to March 2019 over the Seychelles Plateau and a subset of an Ocean General Circulation POP model from the South Tropical Indian Ocean.
Date: Data: 2015 to 2019; Model: 1993 to 2009

Collection

Data from: Observations and Numerical Simulations of the Onset and Growth of Langmuir Circulations

This collection contains data from observations and numerical simulations of Langmuir circulations, along with the relevant routines to generate figures in Andriatis et al. 2024.
Date: 2020-11-04 to 2020-11-25

Collection

Data from: Observations of Double Diffusive Staircase Edges in the Arctic Ocean

CTD profiles collected in the Canada Basin with a Shallow Water Integrated Mapping System (SWIMS).
Date: 2015-09-18 to 2015-09-20

Collection

Data from: Observations of strongly modulated surface wave and wave breaking statistics at a submesoscale front

This collection contains data presented in Vrecica et al 2021, including an overview of a submesoscale front, wave statistics, and wave breaking statistics.
Date: 2018-04-17

Collection

Data from: Observations of surface cobbles at two southern California beaches

Date: 2008 to 2018

Collection

Data from: Observations of Surface Gravity Wave Spectra from Moving Platforms

This collection consists of ocean and atmospheric observations (e.g., waves and winds) collected off the coast of San Diego and San Francisco California from instrumented Boeing Liquid Robotics SV3 Wave Gliders.
Date: 2020-09-01 to 2021-11-04

Collection

Data from: Observations of Tidally Driven Turbulence over Steep, Small-scale Topography Embedded in the Tasman Slope

In-situ observations from the Tasman Tidal Dissipation Experiment (TTIDE) collected around a small-scale bump embedded in the continental slope of Tasmania.
Date: 2015-01 to 2015-03

Collection

Data from: Observing Ocean-Atmosphere Fluxes From Autonomous Surface Vehicles

This collection contains raw and processed data collected from the Research platform FLIP and by two Wave Gliders during the ONR funded Langmuir Cell DRI experiment conducted in Spring 2017 off the coast of Southern California.
Date: 2017-03-21 to 2017-04-06

Collection

Data from: Ocean Surface Salinity Response to Atmospheric River Precipitation in the California Current System

Oceanic and atmospheric measurements, reanalysis and modeled outputs in the California Current System.
Date: 1992 to 2019

Collection

Data from: Overcrowded Housing Reduces COVID-19 Mitigation Measures and Lowers Emotional Health Among San Diego Refugees from September to November of 2020

Data for the present cross-sectional study were collected between September 2020 and November 2020 as part of PANA’s biannual community survey to address the primary research question: What is the association between housing and COVID-19 vulnerability?
Date: 2020-09 to 2020-11

Collection

Data from: pH-Dependent Surface Interactions and Structural Changes for DNA Adsorbed on TiO2 Particle Surfaces Has Implications for Environmental DNA

This collection contains data used in publication and is linked with figure numbers. Data contains ATR-FTIR spectroscopic data, pH measurements and UV-vis measurements.
Date: 2023-08 to 2025-05

Collection

Data from: Plankton energy flows using a global size-structured and trait-based model

This collection includes a global 20 year (1990-2009) climatology of diagnostic and prognostic variables for the Size-based Plankton Ecological TRAits (MARBL-SPECTRA) model.
Date: 1990 to 2009

Collection

Data from: Prediction of Threonine-Tyrosine Kinase Receptor-Ligand Unbinding Kinetics with Multiscale Milestoning and Metadynamics

Heat shock protein 90 (HSP90) and threonine tyrosine kinase (TTK) simulation enabled estimation of kinetic rates (SEEKR) calculations using both steered molecular dynamics and metadynamics.
Date: 2022-05 to 2024-06

Collection

Data from: Psychometric Evaluation of the Verbal List Learning Task with Food Words (VLLT-Food)

Data collected from participants completing two versions of a verbal list learning task to evaluate whether modifying the stimuli impacted performance.
Date: 2017-08 to 2018-05

Collection

Data from: QMrebind: Incorporating quantum mechanical force field reparameterization at the ligand binding site for improved drug-target kinetics through milestoning simulations

The data set contains the files necessary to recalculate/reproduce the unbinding rates of ligands for the model host-guest systems and Hsp90-inhibitor complexes in the paper "QMrebind: Incorporating quantum mechanical force field reparameterization at the ligand binding site for improved drug-target kinetics through milestoning simulations."
Date: 2021 to 2023

Collection

Data from: Quantifying Bioluminescent Light Intensity in Breaking Waves using Numerical Simulations

This collection features velocity, volume fraction, and velocity gradient data interpolated onto a uniform Cartesian grid, along with Basilisk code for simulating breaking waves and Julia code for simulating bioluminescence.
Date: 2024

Collection

Data from: Quantifying influence of human choice on the automated detection of Drosophila behavior by a supervised machine learning algorithm

This data collection contains original movie files, files derived from a tracking program (FlyTracker) and a machine learning-based behavioral classification suite (JAABA), and behavior classifiers for Drosophila social behaviors. These constitute source data of our publication (Leng, X., et al., 2020, in press). With our custom codes (available at https://github.com/asahinak/Leng_Wohl_etal_2020_JAABA_vs_human_annotation), readers can reproduce all the results presented in the article.
Date: 2015-03 to 2018-09

Collection

Data from: Quantitative regional observations of the geological influence on primary sandy beaches

The dataset includes mapped beach elevations, and gravel/bedrock locations in GeoTIFF format.
Date: 2017-10-01 to 2021-03-31

Collection

Data from: Readily Available Primary Aminoboranes as Powerful Reagents for Aldimine Synthesis

Date: 2017 to 2018

Collection

Data from: Real-time ground motion records of coastal cliff failures in San Diego County, California

Data from in situ geophysical sensors (tilt, creep, and displacement), weather and environmental records (temperature, precipitation, and wave height), and tides (height), collected in San Diego County (San Elijo State Beach and Del Mar) in 2023 and 2024.
Date: 2023 to 2025

Collection

Data from Scripps Research Expeditions 1953-2005

Data and documents from Scripps Institution of Oceanography research vessel expeditions from 1953-2005, including geophysical, water column, and sea surface measurements.
Date: 1953 to 2005

Collection

Data from: Seasonal cycle and annual reversal of the Somali Current in an eddy-resolving global ocean model

The dataset includes a subset of model output from a global 0.1-deg CORE-II forced POP simulation near the region of the Arabian Sea, supporting the Journal of Geophysical Research: Oceans article with the same name.
Date: 2005 to 2009

Collection

Data from: SEEKR2: Versatile Multiscale Milestoning Utilizing the OpenMM Molecular Dynamics Engine

This data set contains the files necessary to recreate the results in the paper "SEEKR2: Versatile Multiscale Milestoning Utilizing the OpenMM Molecular Dynamics Engine".
Date: 2020-08 to 2022-03

Collection

Data from: Selectivity and ranking of tight-binding JAK-STAT inhibitors using Markovian milestoning with Voronoi tessellations

The data contains the Simulation Enabled Estimation of Kinetic Rates (SEEKR) simulations for the JAK2 and JAK3-ligand complexes with instructions to compute the residence times of the ligands in these complexes.
Date: 2020 to 2022

Collection

Data from: Sensitivities of the West Greenland Current to Greenland Ice Sheet Meltwater in a Mesoscale Ocean/Sea Ice Model

Diagnostics from a high-resolution global coupled ocean/sea-ice (POP/CICE5) simulations. Diagnostics are calculated based on 1992-1993 for three meltwater forcing experiments: a control run, surface forcing, and spread forcing.
Date: Model creation: 2016 to 2023. Model representation: 1992 to 1993

Collection

Data from: Short-term variability of atmospheric helium revealed through a cryo-enrichment method

He/N2 observations from Scripps Pier and supplementary O2/N2, Ar/N2 and CO2 data.
Date: 2022-04-23 to 2022-05-25

Collection

Data from: Singlet Carbenes are Stereoinductive Main Group Ambiphiles

All output files for reactants, products, reaction intermediates, and transition states involved in insertion of chiral cyclic(alkyl)(amino)carbenes to E-H bonds. Additionally, output files from the simulation of NMR spectra for select products.
Date: 2024-05 to 2025-01

Collection

Data from: Soft robotic steerable micro-catheter for the endovascular treatment of cerebral disorders

Results of analysis and experiment on steerable microcatheters and microguidewires, including video and raw data.
Date: 2017-01-01 to 2021-06-30

Collection

Data from: Southern California Coastal Response to the 2015-16 El Niño

Airborne lidar datasets collected on 6-October-2015 and 22-March-2016, and processed into 1-m resolution digital elevation models.
Date: 2015 to 2016

Collection

Data from: Spatial Analysis and Heritage Conservation: Leveraging 3-D Data and GIS for Monitoring Çatalhöyük Earthen Architecture

This collection includes the remote sensing dataset recorded at Çatalhöyük, Turkey, between 2012-2017. The deterioration of earthen architecture through time was assessed by comparing these 3-D data and with geo spatial methods.
Date: 2012 to 2017

Collection

Data from: Spatial and temporal structure of the fog life cycle over Atlantic Canada and the Grand Banks

This collection contains the ocean and atmospheric data collected over 71 years over Atlantic Canada and the Grand Banks that was used to generate the figures from Formby-Fernandez et. al (2024).
Date: 1950 to 2020

Collection

Data from: Spectral Refraction Modeling of Waves around the Steep Reef at Palau

This collection contains observations of bulk wave statistics from 10 sites around the island chain of Palau and wave estimates from a spectral refraction model.
Date: 2013 to 2023

Collection

Data from: Structural basis for ligand modulation of the CCR2 conformational landscape

This collection contains the molecular dynamics trajectories and analysis scripts used in the paper “Structural basis for ligand modulation of the CCR2 conformational landscape”.
Date: 2017 to 2018

Collection

Data from: Subaerial Profiles at Two Beaches: Equilibrium and Machine Learning

This collection contains observations of beach elevation and model derived wave statistics from two locations in San Diego County: Torrey Pines State Beach and Black’s Beach (La Jolla, CA).
Date: 2015-01 to 2023-12

Collection

Data from: Superconductivity Found in Meteorites

This data details the discovery and analysis of superconducting material in two meteorites. These are the first superconducting materials found in extraterrestrial samples and the superconducting phases are characterized as alloys of lead, tin and indium.
Date: 2016 to 2019

Collection

Data from: Technical Note: Stability of tris pH buffer in artificial seawater stored in bags

pH and total dissolved inorganic carbon measurements from tris buffer in artificial seawater stored in gas impermeable bags.
Date: 2018-05-24 to 2019-12-20

Collection

Data from: The 1991 California 'Miracle March': Precipitation Myth or Miracle?

This collection contains the data and code necessary to reproduce the plots and analysis for "The 1991 California “Miracle March”: Precipitation Myth or Miracle?", published in Environmental Research Communications by Poulsen et al. (2025).
Date: 1900 to 2023

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