Browse by Collection: UCSD Research Data Collections

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1. 
   Collection

   Data from: 'Whale Wave': shifting strategies structure the complex use of critical fjord habitat by humpbacks

   • This collection contains the data, R programming files, and detailed protocols for various aspects of analysis for the publication: Keen et al. 2016. "Whale Wave": shifting strategies structure the complex use of critical fjord habitat by humpbacks.
   • Date: 2005 to 2015
2. 
   Collection

   Cell Centered Database

   • A collection of high resolution 2D, 3D and 4D data from light and electron microscopy of tissues from the nervous system and other systems.
   • Date: 1986 to 2012
3. 
   Collection

   California Smokers Cohort (CSC)

   • The objective of this survey was to collect statewide data on tobacco-related behaviors, knowledge of and attitudes towards smoking, and monitoring the effect of State-initiated programs on individual target populations.
   • Date: 2011 to 2012
4. 
   Collection

   Data from: Urbanization-induced habitat fragmentation erodes multiple components of temporal diversity in a Southern California native bee assemblage

   • A dataset of bees and plants in coastal sage scrub reserves and habitat fragments in coastal San Diego County, collected by PhD student Keng-Lou James Hung in 2011 and 2012.
   • Date: 2011-04-12 to 2012-08-13
5. 
   Collection

   Stack Gas and Plume Aerosol Measurements from Renewable Diesel and Ultra Low Sulfur Diesel in At-Sea Operation of Research Vessel Robert Gordon Sproul

   • Gas and particle emissions from the R/V Sproul were measured in September 2014 and 2015 using two sets of real-time instruments, with gas analyzers sampling directly from the stack and particle instruments intercepting the “fresh” plume, directly after emission into the atmosphere.
   • Date: 2014-09-29 to 2015-12-05
6. 
   Collection

   Data from: Is the Mediterranean the New Rio Grande? U.S. and E.U. Immigration Pressures in the Long Run

   • This project uses a gravity-style model to project bilateral migration flows for the next 40 years. It shows that Europe—unlike the US—will face substantial, demographically driven migration pressures from across the Mediterranean for decades to come.
   • Date: 2016-01-01 to 2016-05-31
7. 
   Collection

   Data from: The Agricultural Productivity Gap

   • Dataset contains data by country for about 150 countries on GDP per capita, employment share in agriculture, value added share in agriculture, agricultural productivity gap, average hours worked, years of schooling, and human capital.
   • Date: 1988 to 2011
8. 
   Collection

   CAVEcam Virtual Reality Photography Collection

   • Full-surround 3-D images make up this collection of original and rendered composite images called CAVEcams which are very high-resolution images for both left and right eye, normally viewed in virtual reality systems, either CAVEs or HMDs.
   • Date: 2009 to 2016
9. 
   Collection

   Data from: Who's Asking? Interviewer Coethnicity Effects in African Survey Data

   • This collection contains the code, data, and output files associated with the article indicated herein.
   • Date: 2012
10. 
    Collection

    California Cooperative Oceanic Fisheries Investigations (CalCOFI): Acoustic and Trawl Data

    • This is a voluminous data set containing acoustic and trawl data collected on CalCOFI (California Cooperative Oceanic Fisheries Investigations) cruises.
    • Date: 2009 to 2015
11. 
    Collection

    dataMares: Fisheries

    • This collection contains robust, high-quality scientific information related to Mexico-specific ocean fisheries and their relationship to marine reserves, coastal and marine ecosystems, and climate change. It also contains datasets with information on fishing activities collected with the participation of local fishermen.
    • Date: 1950-01-01 to present
12. 
    Collection

    dataMares Collection

    • DataMares holds a massive amount of fishery, reef, mangrove, and other data pertaining to the ecology of Mexico, particularly coastal and marine ecosystems of the Gulf of California, and delivers this information in an interactive and digestible manner.
    • Date: 1998 to present
13. 
    Collection

    Carbonaceous Aerosol Particle Measurements from Cal-Mex 2010 in Tijuana, Mexico

    • Single Particle Soot Photometer (SP2) measurements of aerosol refractory black carbon (BC) content for individual particles and Fourier Transform Infrared (FTIR) spectroscopic analysis of organic functional groups of submicron particles at Parque Morelos during Cal-Mex 2010 from 15 May to 30 June.
    • Date: 2010-05-15 to 2010-06-30
14. 
    Collection

    Women's Healthy Eating and Living (WHEL) Study

    • The WHEL Study was a multisite, randomized, controlled trial of the effectiveness of a high-vegetable, low-fat diet in reducing additional breast cancer events and early death in women with early-stage invasive breast cancer.
    • Date: 1995 to 2006
15. 
    Collection

    Keith Rayner Eye Movements in Reading Data Collection

    • This collection consists of data and materials from a subset of published eye movement studies of reading conducted in Keith Rayner’s Eyetracking Lab at UCSD from 2008-2015
    • Date: 2008 to 2015
16. 
    Collection

    An annotated checklist of the bees (Hymenoptera: Anthophila) of San Diego County, California

    • This database represents an ongoing survey to document all the bee species that occur within the bounds of San Diego County. As this project is still ongoing, the database will be updated periodically with additions and/or corrections.
    • Date: July 2015 to August 2020
17. 
    Collection

    Data from: Allostery through the Computational Microscope: cAMP Activation of a Canonical Signalling Domain

    • This collection contains the molecular dynamics trajectories scripts and models used in the paper “Allostery through the computational microscope: cAMP activation of a canonical signalling domain”.
    • Date: 2014-08-24
18. 
    Collection

    Data from: Carbonic Anhydrases, EPF2 and a Novel Protease Mediate CO2 Control of Stomatal Development

    • RNA-Seq experiments analyzing the Arabidopsis response to low and elevated carbon dioxide growing conditions were conducted to capture early signaling events as seedlings were adapting to stress.
    • Date: 2012 to 2013
19. 
    Collection

    Data from: Multiscale Estimation of Binding Kinetics Using Brownian Dynamics, Molecular Dynamics and Milestoning

    • The kinetic rate constants of four biochemically relevant ligand-receptor systems were estimated and described in a publication. This collection includes input files, output files, trajectories, and statistics associated with the study.
    • Date: 2013 to 2015
20. 
    Collection

    Heavy Metals in the Ocean Insect, Halobates

    • Data on 7 heavy metals are available from samples of Halobates collected from the Pacific Ocean: Cr (chromium), Cu (copper), Pb (lead), Mn (manganese), Ni (nickel), Ti (titanium) and Zn (zinc).
    • Date: 1961 to 1978