Library Digital Collections
Library Digital Collections

Microscopy product ID: 7636

Component

Segmentation

Description

Manual segmentation of mitochondrial membranes using Xvoxtrace followed by surfacing using Synu

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Full resolution data file

File Size
  • 30.6 MB
File Format
  • ZIP
Description

Segmentation files including the manual contours generated with Xvotrace (.trace) and and surfaced objects in Synu format (.synu, Viewdata), and .surf files. Note: the volume referenced in the Xvoxtrace file was no longer available. The reconstruction provided in the Reconstruction record should work.

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Reconstruction

Description

Single computed slice from a tomographic reconstruction through the Calyx of Held of an adult cat. The mitochondrion in the presynaptic terminal exhibits a structural specialization termed the mitochondrial adherens complex.

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Full resolution data file

File Size
  • 24.4 MB
File Format
  • ZIP
Description

Tar file containing the volume in Analyze 7.5 format. Both the .img (queen_sub.img_ and .hdr (queen_sub.hdr) files are included.

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Animation

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Description

Animation through the computed slices of a tomographic reconstruction through the Calyx of Held of an adult cat. The mitochondrion in the presynaptic terminal exhibits a structural specialization termed the mitochondrial adherens complex.

Full metadata

CCDB XML

File Size
  • 5.05 KB
File Format
  • XML
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Collection
Cite This Work

Perkins, Guy A.; Spirou, George (2017). Microscopy product ID: 7636. In Cell Centered Database. UC San Diego Library Digital Collections. https://doi.org/10.6075/J0PR7VSJ

Creation Date
  • Project: 2003-06-01 to 2010-01-20.
Date Issued
  • 2017
Research Team Head
Researcher
Technical Details

Male

Product type: SINGLE TILT. Microscopy type: IVEM. Instrument: JEOL 4000EX

Funding

National Institutes of Health

Series
Scientific Name
Anatomy
Topic

Formats

View formats within this collection

Language
  • No linguistic content; Not applicable
Related Resources

    Primary associated publication

    • Perkins GA, Tjong J, Brown JM, Poquiz PH, Scott RT, Kolson DR, Ellisman MH, Spirou GA (2010). The micro-architecture of mitochondria at active zones: electron tomography reveals novel anchoring scaffolds and cristae structured for high-rate metabolism. J Neurosci, 30(3):1015-1026. PubMed: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2829299/; Journal of Neuroscience. https://doi.org/10.1523/JNEUROSCI.1517-09.2010

    Other version

License

Creative Commons Attribution 4.0 International Public License

Rights Holder
  • UC Regents
Copyright

Under copyright (US)

Use: This work is available from the UC San Diego Library. This digital copy of the work is intended to support research, teaching, and private study.

Constraint(s) on Use: This work is protected by the U.S. Copyright Law (Title 17, U.S.C.). Use of this work beyond that allowed by "fair use" or any license applied to this work requires written permission of the copyright holder(s). Responsibility for obtaining permissions and any use and distribution of this work rests exclusively with the user and not the UC San Diego Library. Inquiries can be made to the UC San Diego Library program having custody of the work.

Digital Object Made Available By

Research Data Curation Program, UC San Diego, La Jolla, 92093-0175 (https://lib.ucsd.edu/rdcp)

Last Modified

2023-05-22