{"CIL_CCDB":{"Status":{"Is_public":true,"Deleted":false,"Publish_time":1705543560},"Data_type":{"Still_image":true,"Z_stack":false,"Video":false,"Time_series":false},"CIL":{"CORE":{"TECHNICALDETAILS":{"free_text":"Scans of H&E-stained histology slides of biopsied tissue from endoscopy. Captured with MikroScan SL5 in SVS TIFF format with .tif file extension."},"TERMSANDCONDITIONS":{"free_text":"attribution_cc_by"},"ATTRIBUTION":{"OTHER":["P20483_patient_3"],"URLs":[{"Label":"CHOC Research Institute - Children's Hospital of Orange County","Href":"https:\/\/www.choc.org\/research\/"},{"Label":"Pediatric IBD Structured Data","Href":"https:\/\/cildata.crbs.ucsd.edu\/media\/images\/55781\/Pediatric_IBD_StructuredData.xlsx"}],"Contributors":["Chloe Martin-King","Ali Nael","Louis Ehwerhemuepha","Blake Calvo","Quinn Gates","Jamie Janchoi","Elisa Ornelas","Melissa Perez","Andrea Venderby","John Miklavcic","Peter Chang","Kenneth Grant"]},"IMAGINGMODE":[{"free_text":"Static digital pathology tissue scans"}],"BIOLOGICALPROCESS":[{"free_text":"Pediatric Inflamatory Bowel Disease"}],"IMAGEDESCRIPTION":{"free_text":"Scan 03_D_EP_C -- The dataset consists of 951 tissue section scans taken from 167 H&E-stained whole slides from 18 pediatric inflammatory bowel disease (IBD) patients. Slide section scans are provided as-is without any initial image pre-processing, normalization, or cropping. Labels are provided at the patient, slide (anatomic site), and section (tissue slice) levels. Each slide is labelled with biopsy site and normal or abnormal classification per the surgical pathology report. Each tissue section scan from an abnormal slide is further classified as normal or abnormal by pathologist. Files may be viewed and annotated using standard, opensource slide-viewing software, such as Aperio ImageScope, OpenSlide\u200B\u200B, TiffSlide, and QuPath\u200B\u200B."},"NCBIORGANISMALCLASSIFICATION":[{"onto_name":"Homo sapiens","onto_id":"NCBITaxon:9606"}],"VISUALIZATIONMETHODS":[{"free_text":"Hematoxylin and eosin"}],"GROUP_ID":"20118"},"Image_files":[{"File_type":"Jpeg","File_path":"55875.jpg","Size":158222,"Mime_type":"image\/jpeg; charset=utf-8"},{"File_type":"Zip","File_path":"55875.zip","Size":150410578,"Mime_type":"application\/zip"}]},"Citation":{"Title":"Chloe Martin-King;Ali Nael;Louis Ehwerhemuepha;Blake Calvo;Quinn Gates;Jamie Janchoi;Elisa Ornelas;Melissa Perez;Andrea Venderby;John Miklavcic;Peter Chang;Kenneth Grant (2024) CIL:55875, Homo sapiens. CIL. Dataset","ARK":"ark:\/b7295\/w9cil55875","DOI":"doi:10.7295\/W9CIL55875"}}}